• The Plant Proteome Database is a National Science Foundation-funded project to determine the biological function of each protein in plants. It includes...
    2 KB (111 words) - 19:31, 19 August 2024
  • Thumbnail for Proteome
    Bioinformatics List of omics topics in biology Plant Proteome Database Transcriptome Interactome Human Proteome Project BioPlex Human Protein Atlas Johnson...
    26 KB (3,013 words) - 14:07, 18 July 2025
  • Thumbnail for Proteomics
    infection, and hormones that send important signals throughout the body. The proteome is the entire set of proteins produced or modified by an organism or system...
    78 KB (9,072 words) - 15:13, 24 June 2025
  • look for similar proteins in the Uniprot database with annotation on subcellular localization information. Proteome Analyst then uses a machine-learned classifier...
    4 KB (455 words) - 19:31, 16 August 2024
  • Thumbnail for Metabolome
    complete set of genes (the genome), the complete set of proteins (the proteome) and the complete set of transcripts (the transcriptome). The first book...
    27 KB (3,171 words) - 12:41, 31 July 2024
  • and secreted into the extracellular space. In humans, this subset of the proteome encompasses 13-20% of all proteins, including cytokines, growth factors...
    7 KB (788 words) - 19:05, 29 March 2023
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    Garlic (redirect from Garlic (plant))
    fertility: transcriptome and proteome analyses provide insight into flower and pollen development". Frontiers in Plant Science. 6: 271. Bibcode:2015FrPS...
    64 KB (7,065 words) - 11:47, 29 July 2025
  • other -ome based biological fields of study; it is complementary to the proteome and the metabolome and encompasses the translatome, exome, meiome and...
    40 KB (4,861 words) - 01:44, 24 May 2025
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    (2017-04-16). "Salt stress–induced changes in antioxidative defense system and proteome profiles of salt-tolerant and sensitive Frankia strains". Journal of Environmental...
    17 KB (1,245 words) - 13:56, 17 June 2025
  • Thumbnail for Nepenthes
    (/nɪˈpɛnθiːz/ nih-PEN-theez) is a genus of carnivorous plants, also known as tropical pitcher plants, or monkey cups, in the monotypic family Nepenthaceae...
    64 KB (6,993 words) - 06:13, 27 July 2025
  • database. There are also several subcellular location databases with computational predictions, such as the fungal secretome and subcellular proteome...
    3 KB (318 words) - 12:28, 21 July 2024
  • Thumbnail for Thylakoid
    Thylakoid (category Plant anatomy)
    Thylakoid Membrane Proteome of Arabidopsis thaliana Chloroplasts: New Proteins, New Functions, and a Plastid Proteome Database". Plant Cell. 16 (2): 478–99...
    38 KB (4,495 words) - 20:49, 23 July 2025
  • Biobase (company) (category Database providers)
    The early flagship of Proteome was the Yeast Proteome Database (YPD), which was complemented by a number of similar databases. Their latest achievement...
    15 KB (1,310 words) - 18:58, 13 February 2025
  • Thumbnail for Arabidopsis thaliana
    Arabidopsis thaliana (category Plant models)
    reference proteome. The plastome of A. thaliana is a 154,478 base-pair-long DNA molecule, a size typically encountered in most flowering plants (see the...
    79 KB (8,709 words) - 19:53, 26 June 2025
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    ISBN 978-0-19-963789-8. Kozlowski LP (January 2017). "Proteome-pI: proteome isoelectric point database". Nucleic Acids Research. 45 (D1): D1112 – D1116. doi:10...
    105 KB (10,974 words) - 18:23, 16 July 2025
  • 1099/00207713-52-4-1155. PMID 12148621. Tolonen, AC; Haas, W; et, al (Jan 2011). "Proteome-wide systems analysis of a cellulosic biofuel-producing microbe". Molecular...
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  • Thumbnail for Protease
    Protease (section Plants)
    Pevzner PA (January 2008). "Does trypsin cut before proline?". Journal of Proteome Research. 7 (1): 300–305. doi:10.1021/pr0705035. PMID 18067249. Renicke...
    27 KB (2,913 words) - 20:28, 15 July 2025
  • Thumbnail for Bacillus thuringiensis
    and the methyl-accepting chemotaxis protein BC5034. It has a similar proteome diversity to its close relative B. cereus. Into the BT Cotton protein is...
    79 KB (8,011 words) - 21:12, 29 July 2025
  • Thumbnail for Metabolomics
    the metabolome and the other cellular ensembles (genome, transcriptome, proteome, and lipidome), which can be used to predict metabolite abundances in biological...
    63 KB (7,059 words) - 23:09, 12 May 2025
  • Thumbnail for Corn smut
    Corn smut (category Fungal plant pathogens and diseases)
    Corn smut is a plant disease caused by the pathogenic fungus Mycosarcoma maydis, synonym Ustilago maydis. One of several cereal crop pathogens called...
    27 KB (3,104 words) - 16:50, 28 July 2025
  • Thumbnail for Interactome
    the management and the analysis of proteome-wide virus-host interaction networks". Nucleic Acids Res. 37 (Database issue): D661–8. doi:10.1093/nar/gkn794...
    61 KB (6,616 words) - 16:12, 22 July 2025
  • Peptide Search Engine Integrated into the MaxQuant Environment". Journal of Proteome Research. 10 (4): 1794–1805. doi:10.1021/pr101065j. ISSN 1535-3893. PMID 21254760...
    82 KB (4,006 words) - 04:42, 18 July 2025
  • Thumbnail for World Community Grid
    from five plant families and their proteomes, for which WCG was used in the creation of over 29,000 protein structures; a paper on the proteome of Saccharomyces...
    96 KB (8,916 words) - 11:06, 8 February 2025
  • Thumbnail for Medicago truncatula
    Medicago truncatula (category Plant models)
    2305/IUCN.UK.2016-3.RLTS.T176489A19401776.en. NRCS. "Medicago truncatula". PLANTS Database. United States Department of Agriculture (USDA). Retrieved 28 January...
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  • set of 1,733 Fold superfamily domains (FSF) in use of a comparison of proteomes and functionomes for to identify the origin of cellular diversification...
    21 KB (2,203 words) - 16:13, 24 June 2025
  • Thumbnail for Peroxisome
    wild-type gene. Two independent evolutionary analyses of the peroxisomal proteome found homologies between the peroxisomal import machinery and the ERAD...
    33 KB (3,858 words) - 08:36, 3 August 2025
  • Thumbnail for Helicobacter pylori
    start codons as the consensus Shine–Dalgarno sequence in H. pylori. The proteome of H. pylori has been systematically analyzed, and more than 70% of its...
    150 KB (16,798 words) - 21:46, 15 July 2025
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    GC content varies from 68.8-74.7% (average: 71.7%). The 95% soft-core proteome of the genus consists of approximately 2000-2400 proteins. The pangenome...
    38 KB (3,756 words) - 13:41, 12 July 2025
  • Thumbnail for Systems biology
    insights and its focus on the metabolome, fluxome, transcriptome, and/or proteome. Top-down methods prioritize overall system states as influencing factors...
    99 KB (10,413 words) - 02:02, 3 July 2025
  • Thumbnail for Potyvirus
    Potyvirus (category Viral plant pathogens and diseases)
    formed during Potato virus A infection: PVA replication complex proteome". Molecular Plant Pathology. 17 (6): 943–958. doi:10.1111/mpp.12341. PMC 6638329...
    46 KB (5,378 words) - 12:32, 9 June 2025