The Protein–RNA Interface Database (PRIDB) is a database of protein–RNA interfaces extracted from the Protein Data Bank. RNA-binding protein Protein Data...
1 KB (76 words) - 22:15, 20 July 2020
Nucleoprotein (category Proteins)
are proteins conjugated with nucleic acids (either DNA or RNA). Typical nucleoproteins include ribosomes, nucleosomes and viral nucleocapsid proteins. Nucleoproteins...
18 KB (1,966 words) - 10:10, 8 June 2025
provided. Human Protein Atlas (HPA): a public database with expression profiles of human protein coding genes both on mRNA and protein level in tissues...
36 KB (2,870 words) - 13:29, 28 April 2025
(non-coding RNA) or by forming a template for the production of proteins (messenger RNA). RNA and deoxyribonucleic acid (DNA) are nucleic acids. The nucleic...
66 KB (7,680 words) - 02:53, 3 July 2025
Protein–protein interactions (PPIs) are physical contacts of high specificity established between two or more protein molecules as a result of biochemical...
74 KB (8,383 words) - 11:23, 12 July 2025
Argonaute (redirect from Argonaute protein)
non-coding RNAs, including microRNAs (miRNAs), small interfering RNAs (siRNAs) and Piwi-interacting RNAs (piRNAs). Small RNAs guide Argonaute proteins to their...
17 KB (2,020 words) - 19:08, 30 March 2025
Sequence analysis (redirect from Sequence analysis, rna)
believed to be the first to sequence an RNA molecule. Nucleotide sequence analyses identify functional elements like protein binding sites, uncover genetic variations...
33 KB (3,896 words) - 10:43, 30 June 2025
Secretory proteins are synthesized in the endoplasmic reticulum. The production of a secretory protein starts like any other protein. The mRNA is produced...
4 KB (529 words) - 15:18, 21 June 2025
Rfam (redirect from RNA families)
contribute to Wikipedia's RNA WikiProject. The Rfam database can be used for a variety of functions. For each ncRNA family, the interface allows users to: view...
11 KB (1,164 words) - 21:01, 11 December 2023
Virus (redirect from Nucleocapsid protein)
i.e., long molecules of DNA or RNA that encode the structure of the proteins by which the virus acts; (ii) a protein coat, the capsid, which surrounds...
155 KB (18,326 words) - 15:19, 12 July 2025
community annotation of PDB structures. ProtCID – ProtCID—a database of similar protein–protein interfaces in crystal structures of homologous proteins....
21 KB (2,342 words) - 06:32, 6 July 2025
identified by homology to known proteins. Sorghum MOROKOSHI Sorghum transcriptome database. RIKEN full-length cDNA clone and RNA-Seq data in Sorghum bicolor...
164 KB (20,394 words) - 22:25, 30 June 2025
transcribed into pre-messenger RNA (mRNA) by proteins such as RNA polymerase. Most organisms then process the pre-mRNA (a primary transcript) using various...
105 KB (10,974 words) - 02:46, 10 July 2025
Gene expression (redirect from RNA expression)
produce end products, proteins or non-coding RNA, and ultimately affect a phenotype. These products are often proteins, but in non-protein-coding genes such...
104 KB (11,629 words) - 20:59, 6 July 2025
Eukaryotic large ribosomal subunit (60S) (category Ribosomal RNA)
bacterial protein components (L1 stalk on the left as seen from the subunit interface and L7/L12 on the right). There are three binding sites for tRNA, the...
12 KB (902 words) - 01:12, 21 April 2024
the scaling coefficient for protein distance/RNA distance can be calculated. This coefficient is used to rescale the RNA matrix. The Rosetta Stone or...
25 KB (2,915 words) - 05:18, 2 June 2025
PubChem (category Chemical databases)
covering almost 10,000 unique protein target sequences that correspond to more than 5,000 genes). It also contains RNA interference (RNAi) screening assays...
11 KB (957 words) - 00:41, 4 July 2025
tools generally take a query such as a DNA, RNA, or protein sequence or ‘keyword’ and search one or more databases for information related to that sequence...
12 KB (1,623 words) - 18:24, 11 December 2023
UCSC Genome Browser (category Genome databases)
its MySQL-based database and web interface. The browser featured various aligned annotation tracks, including gene predictions, mRNA/EST alignments, and...
45 KB (3,800 words) - 12:30, 9 July 2025
Transcriptomics technologies (section Isolation of RNA)
its RNA transcripts. The information content of an organism is recorded in the DNA of its genome and expressed through transcription. Here, mRNA serves...
120 KB (12,519 words) - 13:36, 25 January 2025
Atlas of UTR Regulatory Activity (category RNA-binding proteins)
for RNA-binding proteins and miRNA, cis-elements, RNA methylation and editing data, and more, for human and mouse. Through its intuitive web interface, it...
3 KB (217 words) - 06:12, 17 February 2025
Reactome (category Biological databases)
DNA, RNA, and proteins, encoded directly or indirectly in the human genome. Physical entities are cross-referenced to relevant external databases, such...
11 KB (1,259 words) - 11:26, 4 April 2025
Genetic code (category Protein biosynthesis)
information encoded within genetic material (DNA or RNA sequences of nucleotide triplets or codons) into proteins. Translation is accomplished by the ribosome...
74 KB (8,088 words) - 15:23, 30 June 2025
Human genome (redirect from Protein-coding genes)
non-coding DNA. Noncoding RNA molecules play many essential roles in cells, especially in the many reactions of protein synthesis and RNA processing. Noncoding...
99 KB (10,091 words) - 18:43, 12 June 2025
membranes, carbohydrates such as sugars, amino acids for protein metabolism, and nucleic acid DNA and RNA for the mechanisms of heredity. Any successful theory...
203 KB (20,661 words) - 18:46, 11 July 2025
Eukaryotic small ribosomal subunit (40S) (category Ribosomal RNA)
tightly bound by the HCV IRES to form a binary complex mediate by protein-mRNA and rRNA-mRNA interactions. More information can be found in the articles on...
12 KB (1,044 words) - 17:55, 29 December 2023
the three-dimensional structure of biological macromolecules such as proteins, RNA, and DNA. It deals with generalizations about macromolecular 3D structures...
35 KB (3,532 words) - 23:28, 22 May 2024
shuts down host cell RNA, DNA, and protein synthesis to direct cellular resources to virus production. First, the virus protein vhs induces the degradation...
69 KB (7,542 words) - 00:01, 30 June 2025
across many species. RNA polymerase (RNAP) and sigma factors are necessary proteins for transcription of DNA into messenger RNA (mRNA). Eubacterial RNAP...
31 KB (3,534 words) - 15:10, 23 May 2025