variety of non-coding RNAs have been identified in various species of organisms known to science. However, RNAs have also been identified in "metagenomics" sequences...
5 KB (694 words) - 01:29, 3 December 2023
Extracellular RNA RNAs present in environmental samples Shadow Effect (Genetics) Thomsen, Philip Francis; Sigsgaard, Eva E. (2019). "Environmental DNA metabarcoding...
131 KB (13,439 words) - 19:00, 4 May 2025
often called an RNA gene. Abundant and functionally important types of non-coding RNAs include transfer RNAs (tRNAs) and ribosomal RNAs (rRNAs), as well as...
67 KB (7,181 words) - 02:03, 1 May 2025
species, and is thus an example of RNAs present in environmental samples. Termite-flg RNAs are consistently located in what is presumed to be the 5' untranslated...
2 KB (186 words) - 06:26, 5 November 2024
Whalefall-1 RNAs have not been detected in any known, cultivated species of bacteria, and are thus one of several RNAs present in environmental samples. Weinberg...
2 KB (183 words) - 02:20, 28 November 2023
Metagenomics (redirect from Environmental genomics)
allowed researchers to profile the microbial composition of environmental and clinical samples without the need for time-consuming culture of individual...
89 KB (9,244 words) - 11:17, 30 April 2025
Metabarcoding (section Environmental DNA)
derived from one environmental or bulk sample. Environmental DNA or eDNA describes the genetic material present in environmental samples such as sediment...
109 KB (11,311 words) - 00:28, 18 February 2025
(RNA) data and the second using metagenome (DNA) data. These RNAs are present in environmental sequences, and as of 2009 are not known to be present in...
2 KB (257 words) - 23:11, 2 September 2021
Transcriptome (category RNA)
RNA transcripts, including coding and non-coding, in an individual or a population of cells. The term can also sometimes be used to refer to all RNAs...
40 KB (4,861 words) - 02:26, 12 March 2025
comprehensive analysis of microbial and host genetic material (DNA or RNA) in clinical samples from patients by next-generation sequencing. It uses the techniques...
28 KB (3,492 words) - 21:05, 20 October 2024
These RNAs are present in environmental sequences, and when discovered were not known to be present in any cultivated species. However, an IMES-2 RNA has...
3 KB (261 words) - 00:11, 16 February 2023
These RNAs are present in environmental sequences, and as of 2009 are not known to be present in any cultivated species. IMES-3 RNAs are abundant in comparison...
2 KB (178 words) - 23:11, 2 September 2021
bacteria. Thus, this RNA is present in environmental samples, but not yet found in any cultivated organism. potC RNAs are located in the presumed 5' untranslated...
2 KB (183 words) - 05:08, 3 December 2023
IMES-4 RNA motif is a conserved RNA structure that was identified in marine environmental sequences by metagenomics and bioinformatics. These RNAs are present...
2 KB (170 words) - 23:11, 2 September 2021
conventional miRNA detection methods. miRNAs are a category of small, non-coding RNAs in the range of 18-25 base pairs in length. miRNAs regulate cellular...
64 KB (7,163 words) - 16:39, 21 January 2025
The Gut-1 RNA motif (also called gt-1) is a conserved RNA structure identified by bioinformatics. These RNAs are present in environmental sequences, and...
2 KB (148 words) - 02:00, 3 December 2023
RNA molecules, both messenger RNAs that carry genetic material for making proteins and non-coding RNAs that function in varied cellular processes. In...
20 KB (2,022 words) - 18:38, 29 April 2025
DNA barcoding (section Sampling and preservation)
mixture of organisms (bulk sample), or from DNA present in environmental samples (e.g. water or soil). The methods for sampling, preservation or analysis...
99 KB (11,132 words) - 23:02, 4 February 2025
ncRNAs from small non-coding RNAs, such as microRNAs (miRNAs), small interfering RNAs (siRNAs), Piwi-interacting RNAs (piRNAs), small nucleolar RNAs (snoRNAs)...
121 KB (13,136 words) - 04:07, 3 April 2025
specific RNA targets (mRNA, lncRNA and miRNA)[citation needed] in cells, circulating tumor cells, and tissue samples. In this context, it can help define...
39 KB (4,596 words) - 14:41, 2 April 2025
Degradome sequencing (category RNA)
sequencing data and structural RNAs are used to remove all degradome sequences with exact matches to structural RNAs. The cDNA database is then used...
22 KB (2,432 words) - 12:26, 22 February 2024
Transcriptomics technologies (category Wikipedia articles published in peer-reviewed literature)
transcripts. Small RNAs, such as micro RNAs, can be purified based on their size by gel electrophoresis and extraction. Since mRNAs are longer than the...
120 KB (12,519 words) - 13:36, 25 January 2025
PICRUSt (category Environmental microbiology)
soil samples, diverse mammalian samples, and samples from the Guerrero Negro microbial mats Because PICRUSt, and evolutionary comparative genomics in general...
14 KB (1,506 words) - 05:41, 11 January 2025
of thousands of 16S rRNA sequences is possible within hours, allowing metagenomic studies, for example of gut flora. In samples collected from patients...
35 KB (3,900 words) - 15:11, 4 March 2025
used to normalize the samples. Once normalized, a direct comparison of relative transcript abundances across multiple samples of mRNA can be made. One precaution...
45 KB (5,776 words) - 17:52, 21 March 2025
in the form of environmental DNA (eDNA) or cells, is freely diffused in the water. This allows researchers to identify which species are present in a...
30 KB (3,693 words) - 18:13, 15 November 2024
temporally composite samples. These samples contain biomarkers from all the people contributing to a catchment. Collected samples are sent to a laboratory...
30 KB (3,451 words) - 00:29, 9 March 2025
affect neuronal subpopulations present in particular brain regions. An example of WGBS protocol is the following: samples were fragmented and then they...
24 KB (2,999 words) - 05:15, 2 March 2025
of RNAs can be detected by this technology, it is an effective method for more generally determining what types of RNAs are present in exRNAs samples through...
27 KB (2,974 words) - 01:53, 25 March 2025
Biorepository (section Sample Repositories)
different types of specimens, including samples of blood, urine, tissue, cells, DNA, RNA, and proteins. If the samples are from people, they may be stored...
9 KB (906 words) - 06:19, 20 February 2025