Molecular modelling encompasses all methods, theoretical and computational, used to model or mimic the behaviour of molecules. The methods are used in...
12 KB (1,377 words) - 04:14, 27 May 2025
A molecular model is a physical model of an atomistic system that represents molecules and their processes. They play an important role in understanding...
17 KB (1,865 words) - 16:10, 24 May 2025
Molecular modeling on GPU is the technique of using a graphics processing unit (GPU) for molecular simulations. In 2007, Nvidia introduced video cards...
11 KB (1,026 words) - 22:54, 27 May 2025
Monte Carlo molecular modeling List of software for nanostructures modeling Molecular design software Molecular dynamics Molecular modeling on GPUs Molecule...
19 KB (380 words) - 18:01, 26 April 2025
Carlo molecular modelling is the application of Monte Carlo methods to molecular problems. These problems can also be modelled by the molecular dynamics...
4 KB (403 words) - 14:05, 14 January 2024
The Molecular Modeling Database (MMDB) is a database of experimentally determined three-dimensional biomolecular structures and hosted by the National...
2 KB (101 words) - 10:44, 6 June 2019
Molecular mechanics uses classical mechanics to model molecular systems. The Born–Oppenheimer approximation is assumed valid and the potential energy...
19 KB (2,335 words) - 10:26, 24 May 2025
Molecular models of DNA structures are representations of the molecular geometry and topology of deoxyribonucleic acid (DNA) molecules using one of several...
33 KB (3,764 words) - 16:30, 4 May 2025
Corey-Pauling-Koltun (CPK) models. The earliest efforts to produce models of molecular structure was done by Project MAC using wire-frame models displayed on a cathode...
28 KB (2,075 words) - 14:25, 18 June 2025
Lennard-Jones potential (redirect from Molecular repulsion)
archetype model for simple yet realistic intermolecular interactions. The Lennard-Jones potential is often used as a building block in molecular models (a.k...
90 KB (10,677 words) - 03:46, 2 June 2025
density functional theory (DFT) or Hartree–Fock (HF) models to the Schrödinger equation. Molecular orbital theory and valence bond theory are the foundational...
28 KB (3,710 words) - 11:02, 31 May 2025
fragments of information that were required to produce a successful molecular model of DNA, their findings had been based on data collected by researchers...
19 KB (2,344 words) - 11:06, 2 June 2025
In the field of molecular modeling, docking is a method which predicts the preferred orientation of one molecule to a second when a ligand and a target...
34 KB (4,015 words) - 21:27, 6 June 2025
conceptual and model studies and as a building block in many force fields of real substances. First used in theoretical physics, the molecular dynamics method...
84 KB (10,403 words) - 19:33, 16 June 2025
The Molecular Modelling Toolkit (MMTK) is an open-source software package written in Python, which performs common tasks in molecular modelling. The Molecular...
4 KB (319 words) - 21:36, 18 August 2023
In chemistry, the ball-and-stick model is a molecular model of a chemical substance which displays both the three-dimensional position of the atoms and...
5 KB (523 words) - 17:04, 13 June 2025
Molecular biology /məˈlɛkjʊlər/ is a branch of biology that seeks to understand the molecular basis of biological activity in and between cells, including...
49 KB (5,554 words) - 06:34, 26 May 2025
Atomic, molecular, and optical physics (AMO) is the study of matter–matter and light–matter interactions, at the scale of one or a few atoms and energy...
25 KB (2,972 words) - 14:55, 5 June 2025
This is a list of computer programs that use Monte Carlo methods for molecular modeling. Abalone classical Hybrid MC BOSS classical CASINO quantum Cassandra...
7 KB (731 words) - 04:13, 2 June 2025
aqueous solutions with explicit solvent, often using molecular dynamics or Monte Carlo methods. The models describe intermolecular forces between water molecules...
28 KB (3,404 words) - 00:59, 25 May 2025
Molecular design software is notable software for molecular modeling, that provides special support for developing molecular models de novo. In contrast...
7 KB (243 words) - 12:55, 3 December 2024
Force field (chemistry) (category Molecular modelling)
the context of chemistry, molecular physics, physical chemistry, and molecular modelling, a force field is a computational model that is used to describe...
85 KB (9,961 words) - 22:04, 22 May 2025
Molecular geometry. Jemmis mno rules Lewis structure Molecular design software Molecular graphics Molecular mechanics Molecular modelling Molecular symmetry...
23 KB (2,301 words) - 04:26, 11 May 2025
In atomic physics, the Bohr model or Rutherford–Bohr model was a model of the atom that incorporated some early quantum concepts. Developed from 1911 to...
75 KB (10,385 words) - 21:41, 4 June 2025
Molecular phylogenetics (/məˈlɛkjʊlər ˌfaɪloʊdʒəˈnɛtɪks, mɒ-, moʊ-/) is the branch of phylogeny that analyzes genetic, hereditary molecular differences...
18 KB (2,195 words) - 16:28, 25 May 2025
Visual Molecular Dynamics (VMD) is a molecular modelling and visualization computer program. VMD is developed mainly as a tool to view and analyze the...
13 KB (1,234 words) - 05:40, 27 May 2025
system: EM – Electron microscopy HM – Homology modeling MD – Molecular dynamics MM – Molecular modelling, molecular orbital visualizing MRI – Magnetic resonance...
15 KB (662 words) - 22:15, 7 June 2025
Francis Crick (category English molecular biologists)
Harry Compton Crick OM FRS (8 June 1916 – 28 July 2004) was an English molecular biologist, biophysicist, and neuroscientist. He, James Watson, Rosalind...
112 KB (13,711 words) - 15:16, 15 June 2025
Folding@home (category Molecular modelling)
Further, because the computations in kinetic models occur serially, strong scaling of traditional molecular simulations to these architectures is exceptionally...
154 KB (14,574 words) - 19:43, 6 June 2025