Department of Biological Sciences at the University of Pittsburgh. Alpha operon ribosome binding site Eukaryotic translation Bacterial translation Archaeal translation...

The alpha operon ribosome binding site in bacteria is surrounded by this complex pseudoknotted RNA structure. Translation of the mRNA produces 4 ribosomal...

archaea; E = eukarya cytoplasm Alpha operon ribosome binding site Ribosomal protein L20 leader Mitochondrial ribosome, for a list of its protein subunits...

either a single rRNA gene operon or up to four copies of the same operon. The 3' end of the 16S ribosomal RNA (in a ribosome) recognizes a sequence on...

mosaic virus coat protein binding (CPB) RNA Alfalfa mosaic virus RNA 1 5′ UTR stem-loop Alpha operon ribosome binding site Antizyme RNA frameshifting...

amino-acid binding site of this operon can be transcribed. When a second of these amino acids is limited, the next-closest gene to the binding site can be...

upstream of the serC-serA operon in some alpha-proteobacteria. The final stem of the structure overlaps the ribosome binding site of the serC reading frame...

to pL promoter site instead of the pR promotor site. Leftward transcription results in barI and barII transcription on the left operon. Bar positive phenotype...

population from phage proliferation. Another study revealed that a bacterial operon associated with phage defense encodes a complete ubiquitination pathway...

product amino acid of the operon. A terminator structure forms when there is an excess of the regulatory amino acid and ribosome movement over the leader...

allopatric speciation – allosteric binding site – allosteric effector – allosteric enzyme – allosteric site – allozyme – alpha helix – amino acid – aminoacyl...

information on rational design see site-directed mutagenesis. Multivalent binding can be used to increase the binding specificity and affinity through avidity...

Furthermore, many Fis binding sites occur in tandem such as those in the stable RNA promoters, e.g., P1 promoter of rRNA operon rrnB. The coherent bending...

by display techniques: phage display, ribosome display, yeast display or mRNA display. The artificial binding proteins are much smaller than antibodies...

transcription termination. Riboswitch-mediated folding sequesters the ribosome-binding site, thereby inhibiting translation. The riboswitch is a ribozyme that...

- ribosomal-protein-alanine N-acetyltransferase - ribosomal binding sequence - ribosome - ribosyldihydronicotinamide dehydrogenase (quinone) - ribozyme...

directly, while the cap and tail facilitate the transport of the mRNA to a ribosome and protect it from molecular degradation. Post-transcriptional modifications...

studies led to the conclusion that the ribosome is a ribozyme. The rRNA sequences that make up the ribosomal active site represent some of the most highly...

loop, which blocks the RNA polymerase binding site, is present in the absence of ligand and upon ligand binding, an anti-terminator loop forms and the...

transition can then expose or occlude important regions of RNA such as a ribosome binding site, which then affects the translation rate of a nearby protein-coding...

including the urease (ure) operon and the Cag pathogenicity island (PAI). A total of 1,907 transcription start sites 337 primary operons, and 126 additional...

annotated protein-coding genes (organized into 2584 operons), seven ribosomal RNA (rRNA) operons, and 86 transfer RNA (tRNA) genes. Despite having been...

of suppression site in yeast. To build and develop biological systems, regulating components including regulators, ribosome-binding sites (RBSs), and terminators...

transporter mRNAs by targeting C/A-rich elements inside and upstream of ribosome-binding sites". Genes Dev. 21 (21): 2804–2817. doi:10.1101/gad.447207. PMC 2045133...

complexity of peptide binding sites in RNAs. Furthermore, the guanine-sensing riboswitch-aptamer domain of the Bacillus subtilis xpt-pbuX operon, the Diels-Alderase...

have a Shine-Dalgarno sequence at its translation initiation site for the binding of ribosomes, while eukaryotes expression vectors would contain the Kozak...