PROSITE is a protein database. It consists of entries describing the protein families, domains and functional sites as well as amino acid patterns and...
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Sequence motif (section PROSITE pattern notation)
elements. One of these notations is the PROSITE notation, described in the following subsection. The PROSITE notation uses the IUPAC one-letter codes...
24 KB (2,744 words) - 20:17, 22 January 2025
Freeman. p. 603. ISBN 978-0-7167-4339-2. "PROSITE documentation PDOC00095 [for PROSITE entry PS00102]". PROSITE. Muscle phosphorylase deficiency - McArdle's...
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their class, and function/process related to disease causing proteins PROSITE – A database of Consensus patterns for many types of PTM's including sites...
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flanking residues are highly conserved in known P450s, and have the formal PROSITE signature consensus pattern [FW] - [SGNH] - x - [GD] - {F} - [RKHPT] -...
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invertebrates hints at ancient origin of this superfamily in evolution. The PROSITE pattern of this superfamily is located in a beta sheet in the central section...
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PMID 11839496. Helix-turn-helix motif, lambda-like repressor, from EMBL Full PDB entry for PDB ID 1LMB Cro/C1-type HTH domain, more HTHs in PROSITE...
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(3-phosphoshikimate 1-carboxyvinyltransferase) Identifiers Symbol EPSP_synthase Pfam PF00275 InterPro IPR001986 PROSITE PDOC00097 SCOP2 1eps / SCOPe / SUPFAM...
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unit from the hemocyanin of an octopus Identifiers Symbol Hemocyanin_M Pfam PF00372 InterPro IPR000896 PROSITE PDOC00184 SCOP2 1lla / SCOPe / SUPFAM...
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Ribosome-inactivating protein (Ricin A chain) Identifiers Symbol RIP Pfam PF00161 InterPro IPR001574 PROSITE PDOC00248 SCOP2 1paf / SCOPe / SUPFAM...
61 KB (6,868 words) - 06:57, 25 May 2025
point for Ray Martin". TV Tonight. Australia. Behance. "Discontinued -- Prosite". Archived from the original on 30 March 2008. Retrieved 18 March 2008...
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complex. Identifiers Symbol An_peroxidase Pfam PF03098 InterPro IPR019791 PROSITE PDOC00394 SCOP2 1mhl / SCOPe / SUPFAM OPM superfamily 36 OPM protein 1q4g...
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doi:10.1016/S0021-9258(17)31577-6. PMID 8089145. Saposin B-type domain in PROSITE This article incorporates text from the public domain Pfam and InterPro:...
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C-terminal domain hpms2-atpgs Identifiers Symbol DNA_mis_repair Pfam PF01119 Pfam clan CL0329 InterPro IPR013507 PROSITE PDOC00057 SCOP2 1bkn / SCOPe / SUPFAM...
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These include: Pfam - Protein families database of alignments and HMMs PROSITE - Database of protein domains, families and functional sites PIRSF - SuperFamily...
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eLife. 9: e64415. doi:10.7554/eLife.64415. PMC 7758060. PMID 33295875. Prosite entry for Walker A motif, PS00017 Prosite entry for DEAD box motif PS51195...
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parahaemolyticus. Identifiers Symbol SSF Pfam PF00474 InterPro IPR001734 PROSITE PDOC00429 TCDB 2.A.21 OPM superfamily 64 OPM protein 3dh4 CDD cd10322...
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Oleosin Identifiers Symbol Oleosin Pfam PF01277 Pfam clan CL0111 InterPro IPR000136 PROSITE PDOC00639...
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1038/s41576-018-0073-3. PMID 30446728. S2CID 53565676. SCOP 110640 – Piwi domain in SCOP PDOC50822 – Piwi domain in PROSITE UNIPROT Piwi - Piwi domains...
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ELMO/CED-12 family Identifiers Symbol ELMO_CED12 Pfam PF04727 InterPro IPR006816 PROSITE PDOC51335...
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finger C2H2-type domain Archived 2020-04-13 at the Wayback Machine in PROSITE Entry for zinc finger class C2H2 in the SMART database The Zinc Finger...
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3,4-dihydroxybenzoate Identifiers Symbol Dioxygenase_C Pfam PF00775 Pfam clan CL0287 InterPro IPR000627 PROSITE PDOC00079 SCOP2 2pcd / SCOPe / SUPFAM...
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alpha/beta C-terminal domain Identifiers Symbol Ldh_1_C Pfam PF02866 Pfam clan CL0341 InterPro IPR022383 PROSITE PDOC00066 SCOP2 6ldh / SCOPe / SUPFAM...
42 KB (4,795 words) - 15:37, 5 February 2025
bovine brain. Identifiers Symbol Synapsin Pfam PF02078 InterPro IPR001359 PROSITE PDOC00345 SCOP2 1auv / SCOPe / SUPFAM OPM superfamily 123 OPM protein 1auv...
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Bombesin-like peptide Identifiers Symbol Bombesin Pfam PF02044 InterPro IPR000874 PROSITE PDOC00230...
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Leghaemoglobin, iron-binding site Identifiers Symbol Leghaemoglobin_Fe_BS InterPro IPR019824 PROSITE PS00208...
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Identifiers Symbol Thaumatin Pfam PF00314 InterPro IPR001938 SMART SM00205 PROSITE PDOC00286 SCOP2 1thu / SCOPe / SUPFAM OPM superfamily 168 OPM protein 1aun...
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domain Structure of porcine C5adesArg. Identifiers Symbol ANATO Pfam PF01821 InterPro IPR000020 SMART ANATO PROSITE PDOC00906 SCOP2 1c5a / SCOPe / SUPFAM...
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bovine rod outer segments. Identifiers Symbol Arrestin_N Pfam PF00339 Pfam clan CL0135 InterPro IPR011021 PROSITE PDOC00267 SCOP2 1cf1 / SCOPe / SUPFAM...
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at 2.5 angstroms resolution Identifiers Symbol Gp_dh_N Pfam PF00044 Pfam clan CL0063 InterPro IPR020828 PROSITE PDOC00069 SCOP2 1gd1 / SCOPe / SUPFAM...
33 KB (3,786 words) - 00:05, 30 July 2024