a protein structure database is a database that is modeled around the various experimentally determined protein structures. The aim of most protein structure...

Protein structure is the three-dimensional arrangement of atoms in an amino acid-chain molecule. Proteins are polymers – specifically polypeptides – formed...

Protein structure prediction is the inference of the three-dimensional structure of a protein from its amino acid sequence—that is, the prediction of...

Classification of Proteins (SCOP) database is a largely manual classification of protein structural domains based on similarities of their structures and amino...

Protein database may refer to: Any protein structure database Any protein sequence database Exact names "Protein" database of the National Institute of...

DeepMind, a subsidiary of Alphabet, which performs predictions of protein structure. It is designed using deep learning techniques. AlphaFold 1 (2018)...

are 3-dimensional images such as protein structures or 3D-reconstructions of anatomical structures. Image databases include, among others: Allen Brain...

structure data to the PDB. Many other databases use protein structures deposited in the PDB. For example, SCOP and CATH classify protein structures,...

biomacromolecule primary structure, most often nucleotide sequence of DNA/RN, and amino acid sequence of proteins, stored in the bioinformatic databases, with the query...

Protein tertiary structure is the three-dimensional shape of a protein. The tertiary structure will have a single polypeptide chain "backbone" with one...

The Open Protein Structure Annotation Network (TOPSAN) is a wiki designed to collect, share and distribute information about protein three-dimensional...

Protein quaternary structure is the fourth (and highest) classification level of protein structure. Protein quaternary structure refers to the structure...

responding to stimuli, providing structure to cells and organisms, and transporting molecules from one location to another. Proteins differ from one another primarily...

The CATH Protein Structure Classification database is a free, publicly available online resource that provides information on the evolutionary relationships...

Similar Proteins or FSSP is a database of structurally superimposed proteins generated using the "Distance-matrix ALIgnment" (DALI) algorithm.The database currently...

(Homology-derived Secondary Structure of Proteins) is a database that combines structural and sequence information about proteins. This database has the information...

Orientations of Proteins in Membranes (OPM) database provides spatial positions of membrane protein structures with respect to the lipid bilayer. Positions...

Protein primary structure is the linear sequence of amino acids in a peptide or protein. By convention, the primary structure of a protein is reported...

3-dimensional structure of every protein encoded by a given genome. This genome-based approach allows for a high-throughput method of structure determination...

PSILO: A Protein Structure Database System PSILO is a protein structure database system that provides a repository for macromolecular and protein-ligand...

The Database of protein conformational diversity (PCDB) is a database of diversity of protein tertiary structures within protein domains as determined...

The Structure atlas of human genome (SAHG) is a database of protein-structure-prediction. Protein structure Motono C, Nakata J, Koike R, Shimizu K, Shirota...

as proteins of known structures, but do not have homologous proteins with known structure. It differs from the homology modeling method of structure prediction...

biology, an intrinsically disordered protein (IDP) is a protein that lacks a fixed or ordered three-dimensional structure, typically in the absence of its...

PDBsum is a database that provides an overview of the contents of each 3D macromolecular structure deposited in the Protein Data Bank (PDB). The original...

a protein structure prediction system developed by DeepMind. PAE estimates the expected positional error for each residue in a predicted protein structure...

"AlphaFold Protein Structure Database - ZFP62 (Rattus norvegicus)". alphafold.ebi.ac.uk. Retrieved 2023-12-17. "AlphaFold Protein Structure Database - ZFP62...

biological database covering protein domains Pfam: database of protein domains Protein Protein structure Protein structure prediction Protein structure prediction...

problem, as many databases must store the same information, e.g. protein structure databases also contain the sequence of the proteins they cover, their...

three-dimensional structure of biological macromolecules such as proteins, RNA, and DNA. It deals with generalizations about macromolecular 3D structures such as...