SILVA is a ribosomal RNA database established in collaboration between the Microbial Genomics Group at the Max Planck Institute for Marine Microbiology...
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Ribosomal ribonucleic acid (rRNA) is a type of non-coding RNA which is the primary component of ribosomes, essential to all cells. rRNA is a ribozyme...
60 KB (7,201 words) - 16:09, 23 May 2025
16S ribosomal RNA (or 16S rRNA) is the RNA component of the 30S subunit of a prokaryotic ribosome (SSU rRNA). It binds to the Shine-Dalgarno sequence...
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investment company SILVA ribosomal RNA database, in microbiology Silva SD, a Spanish football team All pages with titles beginning with Silva All pages with...
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done.) PhyloCode National Center for Biotechnology Information SILVA ribosomal RNA database List of Prokaryotic names with Standing in Nomenclature Parks...
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databases provide alignments and annotations of LSU rRNA sequences for comparative purposes: RDP, the Ribosomal Database Project; SILVA, a ribosomal RNA...
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mRNA transcripts, RNA-Seq can look at different populations of RNA to include total RNA, small RNA, such as miRNA, tRNA, and ribosomal profiling. RNA-Seq...
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on linking the 16S ribosomal RNA genes from all KEGG organisms with 16S rRNA gene sequences found in the SILVA ribosomal RNA database. Originally this tool...
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to cross-validate tree topologies including concatenated ribosomal proteins and ribosomal RNA genes. National Center for Biotechnology Information (NCBI)...
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have recently been verified by a study and comparison of mitochondrial ribosomal gene sequences. Turritopsis are found in temperate to tropical regions...
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components. SILVA is an interdisciplinary project among biologists and computers scientists assembling a complete database of RNA ribosomal (rRNA) sequences...
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Gene expression (redirect from RNA expression)
processing. In the case of ribosomal RNAs (rRNA), they are often transcribed as a pre-rRNA that contains one or more rRNAs. The pre-rRNA is cleaved and modified...
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Staphylococcus aureus (section Small RNA)
protonated amine and/or hydroxyl interactions with the ribosomal RNA of the bacterial 30S ribosomal subunit. Three main mechanisms of aminoglycoside resistance...
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Epigenetics (section RNA methylation)
consisting of mRNA, small and large ribosomal subunits, translation initiation factors and RNA-binding proteins that regulate mRNA function. These neuronal...
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RNA and certain small nuclear RNAs and microRNA RNA polymerase III: transcribes genes encoding transfer RNA, 5s ribosomal RNAs and other small RNAs General...
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involving Gromia, which sampled G. oviformis, used small subunit (SSU) ribosomal RNA genes and concluded that Gromia were members of Cercozoa, a large group...
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; Glockner, F. O. (2007-12-01). "SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB"...
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database. This database integrates sequences from SILVA, Greengenes, and RDP, providing a comprehensive reference for the analysis of ribosomal RNA sequences...
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phosphorylation system, two ribosomal RNAs (12S and 16S), and 14 transfer RNAs (tRNAs). The light strand encodes one subunit and 8 tRNAs. So, altogether mtDNA...
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-1 ribosomal frameshift caused by a slippery sequence (UUUAAAC) and a downstream RNA pseudoknot at the end of open reading frame ORF1a. The ribosomal frameshift...
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database. Retrieved 2011-06-05. All-Species Living Tree Project."16S rRNA-based LTP release 106 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA...
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database. Retrieved 2011-06-05. All-Species Living Tree Project."16S rRNA-based LTP release 106 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA...
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Finally, coamplification of ribosomal protein clusters, ribosomal RNA (rRNA), transfer RNA (tRNA) and nucleolar small RNA (snoRNA) was observed. Increased...
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database. Retrieved 2011-06-05. All-Species Living Tree Project."16S rRNA-based LTP release 106 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA...
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contain proteins (such as adhesion molecules, cytoskeletons, cytokines, ribosomal proteins, growth factors, and metabolic enzymes), lipids (including cholesterol...
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Spiroplasma mirum, causes TSE. Bastian has repeatedly reported that the ribosomal RNA of this bacterium is found in TSE brain tissue and that experimental...
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Living Tree' Project (SILVA LTP) provides a database of 16S rRNA sequences annotated with its own type of taxonomy. Ribosomal database project (RDP) is a...
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with hematuria from Côte d'Ivoire. A cladogram based on 18S ribosomal RNA, 28S ribosomal RNA, and partial cytochrome c oxidase subunit I (COI) genes shows...
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database. Retrieved 2011-06-05. All-Species Living Tree Project."16S rRNA-based LTP release 106 (full tree)" (PDF). Silva Comprehensive Ribosomal RNA...
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Pharmacomicrobiomics (section 16S rRNA Sequencing)
PMID 24288368. Quast, C; Pruesse, E; Yilmaz, P; et al. (2013). ""The SILVA ribosomal RNA gene database project " Improved data processing and web-based tools". Nucleic...
34 KB (3,735 words) - 12:12, 29 October 2024