• The ShineDalgarno (SD) sequence is, sometimes partially, part of a ribosomal binding site in bacterial and archaeal messenger RNA. It is generally located...
    10 KB (1,299 words) - 10:20, 9 April 2025
  • Thumbnail for John Shine
    John Shine AC FRS FAA (born 3 July 1946) is an Australian biochemist and molecular biologist. Shine and Lynn Dalgarno discovered a nucleotide sequence, called...
    10 KB (801 words) - 21:10, 23 September 2024
  • Lynn Dalgarno (born 12 November 1935) is an Australian geneticist known for the discovery of the ShineDalgarno sequence with his graduate student, John...
    13 KB (1,307 words) - 20:45, 26 May 2025
  • Thumbnail for Bacterial translation
    The majority of mRNAs in E. coli are prefaced with a Shine-Dalgarno (SD) sequence. The SD sequence is recognized by an complementary "anti-SD" region on...
    23 KB (2,926 words) - 13:27, 30 May 2025
  • Thumbnail for Nucleic acid sequence
    ubiquitous sequence elements essential for RNA accumulation". Genes & Development. 11 (7): 941–56. doi:10.1101/gad.11.7.941. PMID 9106664. Shine J, Dalgarno L...
    22 KB (2,409 words) - 19:05, 21 May 2025
  • Thumbnail for Tac-Promoter
    operator. It also specifies a ShineDalgarno sequence flanked by two unique restriction sites (portable ShineDalgarno sequence). The tacI and the tacII promoters...
    6 KB (820 words) - 18:45, 17 August 2023
  • Thumbnail for 16S ribosomal RNA
    subunit of a prokaryotic ribosome (SSU rRNA). It binds to the Shine-Dalgarno sequence and provides most of the SSU structure. The genes coding for it...
    35 KB (3,931 words) - 15:00, 5 June 2025
  • the Shine-Dalgarno (SD) sequence in mRNA for bacteria. The SD sequence is located near the start codon which is in contrast to the Kozak sequence which...
    30 KB (3,674 words) - 02:47, 20 June 2025
  • Thumbnail for Prokaryotic small ribosomal subunit
    start codon (5′)-AUG-(3′) of mRNA into position by recognizing the Shine-Dalgarno sequence, a complementary binding site about 8 base pairs upstream from...
    9 KB (1,045 words) - 20:52, 17 September 2024
  • 5'-AGGAGG-3', also called the Shine-Dalgarno (SD) sequence. The complementary sequence (CCUCCU), called the anti-Shine-Dalgarno (ASD) is contained in the...
    12 KB (1,413 words) - 00:17, 20 June 2025
  • UTR contains a ribosome binding site (RBS), also known as the ShineDalgarno sequence (AGGAGGU), which is usually 3–10 base pairs upstream from the initiation...
    21 KB (2,439 words) - 03:53, 25 February 2025
  • Thumbnail for Translation (biology)
    initiation sequence on the mRNA called the ShineDalgarno sequence. The ShineDalgarno sequence binds to a complementary pyrimidine-rich sequence on the 3'...
    36 KB (4,225 words) - 02:57, 1 June 2025
  • Thumbnail for Ribosome
    ribosome first. The ribosome recognizes the start codon by using the Shine-Dalgarno sequence of the mRNA in prokaryotes and Kozak box in eukaryotes.[citation...
    65 KB (7,285 words) - 23:19, 6 June 2025
  • translation, not transcription, is terminated by sequestering the Shine-Dalgarno sequence (ribosomal binding site) in a hairpin-loop structure. While not...
    17 KB (2,243 words) - 10:32, 16 March 2025
  • Thumbnail for Untranslated region
    length. The 5' UTR of prokaryotes consists of the ShineDalgarno sequence (5'-AGGAGGU-3'). This sequence is found 3-10 base pairs upstream from the initiation...
    12 KB (1,454 words) - 11:42, 20 October 2024
  • Lynn Dalgarno (born 1935), Australian geneticist Roy Dalgarno (1910–2001), Australian artist 6941 Dalgarno, main-belt asteroid Shine-Dalgarno sequence, named...
    656 bytes (117 words) - 23:56, 6 June 2022
  • Thumbnail for Helicobacter pylori
    6 nt (median distance) upstream of start codons as the consensus ShineDalgarno sequence in H. pylori. The proteome of H. pylori has been systematically...
    150 KB (16,798 words) - 21:22, 30 June 2025
  • Thumbnail for Biomolecular structure
    RNAs such as U1, U2, U4, U5, U6, U12 and U3, the Shine-Dalgarno sequence, the Kozak consensus sequence and the RNA polymerase III terminator. The secondary...
    22 KB (2,601 words) - 15:55, 4 May 2025
  • Thumbnail for Escherichia virus T4
    bears eukaryote-like intron sequences. The Shine-Dalgarno sequence GAGG dominates in virus T4 early genes, whereas the sequence GGAG is a target for the...
    43 KB (5,371 words) - 08:07, 23 June 2025
  • Thumbnail for Lytic cycle
    (11 ed.). Prentice Hall. ISBN 978-0-13-144329-7. Malys, N (2012). "Shine-Dalgarno sequence of bacteriophage T4: GAGG prevails in early genes". Molecular Biology...
    9 KB (1,315 words) - 23:59, 27 November 2024
  • Thumbnail for Expanded genetic code
    sequence of the mRNA, the Shine-Dalgarno sequence, and the corresponding recognition sequence in the 16S rRNA of ribosomes, the so-called Anti-Shine-Dalgarno-Sequence...
    79 KB (9,144 words) - 21:39, 22 May 2025
  • and termination factors in archaea have homologs in eukaryotes. Shine-Dalgarno sequences only are found in a minority of genes for many phyla, with many...
    4 KB (425 words) - 08:28, 28 October 2024
  • Thumbnail for RNA thermometer
    absent, it has a hairpin-type secondary structure that protects the ShineDalgarno sequence when temperature is low, but once a change occurs in temperature...
    25 KB (2,865 words) - 02:57, 24 May 2024
  • translation is regulated by the accessibility of ribosomes to the Shine-Dalgarno sequence. This stretch of four to nine purine residues are located upstream...
    11 KB (1,481 words) - 15:01, 8 June 2025
  • ribosome binding site (Shine-Dalgarno sequence) to enhance translation of the gene of interest's mRNA, a transcription termination sequence, or, in eukaryotes...
    2 KB (225 words) - 19:05, 1 September 2023
  • bind to the Shine-Dalgarno sequence and PyrC is expressed. Liu, J; Turnbough CL, Jr (May 1994). "Effects of transcriptional start site sequence and position...
    2 KB (290 words) - 20:11, 30 September 2022
  • Thumbnail for FourU thermometer
    highly conserved uridine nucleotides found directly opposite the Shine-Dalgarno sequence on hairpin II (pictured). RNA thermometers such as FourU control...
    12 KB (1,229 words) - 05:30, 8 November 2023
  • (disambiguation) AGGAGG, the Shine-Dalgarno sequence of DNA base pairs. AGGAGGA is the Escherichia coli Shine-Dalgarno sequence Aggar (disambiguation) Aggas...
    2 KB (281 words) - 23:42, 24 June 2024
  • Thumbnail for FolE RNA motif
    of the folE RNA motif are often located nearby to the predicted Shine-Dalgarno sequence of the downstream gene. This arrangement is consistent with a model...
    2 KB (225 words) - 21:38, 6 October 2024
  • Thumbnail for SMK box riboswitch
    S-adenosyl methionine (SAM) to a conformation that blocks the shine-dalgarno sequence and blocks translation of the gene. There are other known SAM-binding...
    3 KB (311 words) - 07:08, 28 December 2022