science, an unrooted binary tree is an unrooted tree in which each vertex has either one or three neighbors. A free tree or unrooted tree is a connected...
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node (that is, it forms a binary tree), and an unrooted bifurcating tree takes the form of an unrooted binary tree, a free tree with exactly three neighbors...
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binary search tree Splay tree Strahler number Tree of primitive Pythagorean triples#Alternative methods of generating the tree Unrooted binary tree Rowan...
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Bethe lattices. Decision tree Hypertree Multitree Pseudoforest Tree structure (general) Tree (data structure) Unrooted binary tree Bender & Williamson 2010...
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Newick format (redirect from Newick tree format)
exactly two immediate descendant nodes for each internal node. An unrooted binary tree that is rooted on an arbitrary internal node has exactly three immediate...
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unrooted binary tree with its leaves labeled by the edges of G. The width of a branch-decomposition is the maximum, over edges e of this binary tree,...
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Branch-decomposition (category Trees (graph theory))
is a hierarchical clustering of the edges of G, represented by an unrooted binary tree T with the edges of G as its leaves. Removing any edge from T partitions...
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the tree (with doubled edges) gives a Stirling permutation, and every Stirling permutation represents a tree in this way. Unrooted binary trees with...
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A top tree is a data structure based on a binary tree for unrooted dynamic trees that is used mainly for various path-related operations. It allows simple...
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Phylogenetic network (section Rooted vs unrooted)
(hybridization networks, usually built from rooted trees, ancestral recombination graphs (ARGs) from binary sequences, median networks from a set of splits...
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as an unrooted binary tree whose leaves are labeled with the vertices of the given graph. Removing any edge from this tree partitions the tree into two...
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elements, represented as an unrooted binary tree with the elements of the matroid at its leaves. Removing any edge of this tree partitions the matroids into...
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Maximum parsimony (redirect from Parsimony tree)
species gives over two million possible unrooted trees. These possibilities must be searched to find a tree that best fits the data according to the...
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Heavy-light decomposition (category Trees (graph theory))
MR 1146687 Klein, Philip N. (1998), "Computing the edit-distance between unrooted ordered trees", Algorithms—ESA '98 (Venice), Lecture Notes in Computer Science...
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choice of polygon to triangulate for each size) and the set of unrooted binary plane trees (up to graph isomorphism, with a fixed ordering of the leaves...
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Computational phylogenetics (redirect from Maximum likelihood phylogenetic tree)
contrast, unrooted trees plot the distances and relationships between input sequences without making assumptions regarding their descent. An unrooted tree can...
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non-trivial problem. It involves searching the discrete space of unrooted binary tree topologies whose size is exponential in the number of leaves. For...
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Bogdanowicz D., Giaro K. 2012. Matching split distance for unrooted binary phylogenetic trees. IEEE/ACM Trans. Comput. Biol. Bioinforma. 9:150–160. Bogdanowicz...
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gene tree is a binary graph that describes the evolutionary relationships between a sample of sequences for a non-recombining locus. A species tree describes...
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Bayesian inference in phylogeny (redirect from Bayesian tree)
likelihood to create the so-called posterior probability of trees, which is the probability that the tree is correct given the data, the prior and the likelihood...
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Instead, the phylogenetic tree can be rooted using any of the species, re-rooted later based on new knowledge, or left unrooted. This is because there is...
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Agreement forest (category Trees (graph theory))
elements of a set X is called a (rooted or unrooted) X-tree. Such a X-tree usually model a phylogenetic tree, where the elements of X (the taxon set) could...
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pair of vertices. Unrooted trees plot the relationship between the input data without assumptions regarding their descent. A rooted tree explicitly identifies...
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Phylogenetic reconciliation (section The specificity of biogeography: a tree like structure for the "evolution" of areas)
such as considering unrooted symbiont trees or dealing with polytomies in Jane. Reconciliation can easily take unrooted lower trees as input, which is...
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Foundation. Sloane, N. J. A. (ed.). "Sequence A000602 (Number of n-node unrooted quartic trees; number of n-carbon alkanes C(n)H(2n+2) ignoring stereoisomers)"...
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date the phylogenetic trees of the seven language families under examination. Five separate runs produced the same (unrooted) tree, with three sets of language...
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that we are considering a single binary character (it can either be + or –) distributed on the unrooted "true tree" with branch lengths proportional...
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Alignment-free sequence analysis (section Slope-Tree)
P-block, an unrooted tree topology is calculated using RAxML. The program Quartet MaxCut is then used to calculate a supertree from these trees. Information...
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Strahler number, a measure of the complexity of rooted trees defined similarly to pathwidth of unrooted trees Diestel & Kühn (2005). Robertson & Seymour (1983)...
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2016-02-08. "NetCGlyc 1.0 Server". www.cbs.dtu.dk. Retrieved 2016-05-09. "8 binary interactions found for search term ANKRD24". IntAct Molecular Interaction...
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