In molecular biology, genome architecture mapping (GAM) is a cryosectioning method to map colocalized DNA regions in a ligation independent manner. It...
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ChIA-PET (section Genome Architecture Mapping (GAM):)
James (March 2017). "Complex multi-enhancer contacts captured by genome architecture mapping". Nature. 543 (7646): 519–524. Bibcode:2017Natur.543..519B. doi:10...
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assist in rendering 3-D visualizations as a smaller process of genome architecture mapping (GAM). These renderings help determine genomic density and radial...
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3D genomic data is through Genome Architecture Mapping (GAM). GAM measures 3D distances of chromatin and DNA in the genome by combining cryosectioning...
39 KB (4,515 words) - 14:22, 30 March 2025
country in West Africa, IOC and UNDP code Gene-activated matrix Genome architecture mapping, in computational biology General Aggression Model Generalized...
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areas of the genome. As an example, analysis of spatially similar loci within the organization in a nucleus with Genome Architecture Mapping (GAM) can be...
50 KB (5,777 words) - 07:42, 7 April 2025
Michael M; Niksiar, Pooya (2018). "Multidimensional mechanics: Performance mapping of natural biological systems using permutated radar charts". PLOS ONE...
20 KB (2,497 words) - 06:58, 5 March 2025
Quantitative trait locus (redirect from Qtl mapping)
"interval mapping" method the likelihood for a single putative QTL is assessed at each location on the genome. However, QTLs located elsewhere on the genome can...
30 KB (3,609 words) - 16:53, 26 March 2025
ML, Price AH, et al. (September 2011). "Genome-wide association mapping reveals a rich genetic architecture of complex traits in Oryza sativa". Nature...
71 KB (6,967 words) - 16:20, 8 May 2025
Sequence assembly (redirect from Genome assembly)
1935. ISSN 1548-7105. Wolf B. "De novo genome assembly versus mapping to a reference genome" (PDF). University of Applied Sciences Western Switzerland....
25 KB (2,944 words) - 18:10, 24 January 2025
Genomics (redirect from Genome biology)
biology focusing on the structure, function, evolution, mapping, and editing of genomes. A genome is an organism's complete set of DNA, including all of...
79 KB (7,644 words) - 14:46, 31 March 2025
Henry Heng (section Genome architecture theory)
using their new framework: the Genome Architecture Theory (GAT). The Genome Architecture Theory focuses more on a genome or chromosome-oriented approach...
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genetic architecture of complex traits in corn (Zea mays). It is important to note that nested association mapping (unlike association mapping) is a specific...
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A (March 2017). "Complex multi-enhancer contacts captured by Genome Architecture Mapping (GAM)". Nature. 543 (7646): 519–524. Bibcode:2017Natur.543..519B...
57 KB (6,636 words) - 13:03, 5 January 2025
Complex traits (section QTL mapping)
studied with statistical techniques like quantitative trait loci (QTL) mapping, and genome-wide association studies (GWAS) on a large scale. The overall goal...
27 KB (2,719 words) - 19:59, 11 September 2024
Genome-wide complex trait analysis (GCTA) Genome-based restricted maximum likelihood (GREML) is a statistical method for heritability estimation in genetics...
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Identity by descent (category Human genome projects)
Lin et al. found a genome-wide significant linkage signal in a dataset of multiple sclerosis patients. Letouzé et al. used IBD mapping to look for founder...
28 KB (2,694 words) - 21:45, 28 February 2025
"Stampy: A statistical algorithm for sensitive and fast mapping of Illumina sequence reads". Genome Research. 21 (6): 936–939. doi:10.1101/gr.111120.110...
69 KB (2,358 words) - 16:30, 27 January 2025
Nuclear organization (redirect from Nuclear architecture)
chromosomes occupy individually distinct nuclear regions. Since then, mapping genome architecture has become a major topic of interest. Over the last ten years...
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genetic expression in the human genome and the quantity of elements that control this regulation. The high-resolution mapping of DHSs in the model plant Arabidopsis...
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chromosomes, are referred to as distant eQTLs or trans-eQTLs. The first genome-wide study of gene expression was carried out in yeast and published in...
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nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions". Genome Research. 25 (11): 1757–1770. Bibcode:2015GenRe...
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cut to become under 500 base pairs each to have the best outcome for genome mapping. The third step is called chromatin immunoprecipitation, which is what...
27 KB (3,353 words) - 03:17, 31 July 2024
nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions". Genome Research. 25 (11): 1757–70. Bibcode:2015GenRe...
17 KB (1,737 words) - 18:24, 1 May 2025
Structural variation in the human genome is operationally defined as genomic alterations, varying between individuals, that involve DNA segments larger...
29 KB (3,756 words) - 22:37, 29 December 2023
This list of sequenced animal genomes contains animal species for which complete genome sequences have been assembled, annotated and published. Substantially...
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iterative mapping. The mapped reads are then each assigned a single genomic alignment location according to its 5’ mapped position in the genome. For each...
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nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions". Genome Research. 25 (11): 1757–1770. Bibcode:2015GenRe...
20 KB (1,752 words) - 01:23, 13 February 2025
nucleosome fingerprints enable high-resolution mapping of chromatin architecture within regulatory regions". Genome Research. 25 (11): 1757–1770. Bibcode:2015GenRe...
20 KB (1,702 words) - 01:38, 13 February 2025
10287621 Schmitt AD, Hu M, Ren B (December 2016). "Genome-wide mapping and analysis of chromosome architecture". Nature Reviews Molecular Cell Biology. 17 (12):...
49 KB (5,404 words) - 20:18, 2 November 2024