The BioCyc database collection is an assortment of organism specific Pathway/Genome Databases (PGDBs) that provide reference to genome and metabolic pathway...
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including those in the BioCyc Database Collection. MetaCyc is also used in metabolic engineering and metabolomics research. MetaCyc includes mini reviews...
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Biological pathway (section Pathways databases)
methylation. BioCyc database collection is an assortment of organism specific Pathway/Genome Databases. Human Protein Reference Database is a centralized...
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development of the BioCyc database collection (which includes the highly curated EcoCyc and MetaCyc databases). BioCyc databases combine genome, metabolic...
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Center, Cold Spring Harbor Laboratory) WikiPathways BioCyc Database Collection: includes EcoCyc and MetaCyc BRENDA: the comprehensive enzyme information system...
36 KB (2,870 words) - 13:29, 28 April 2025
PMID 11481443. "Superpathway of choline biosynthesis". BioCyc Database Collection: MetaCyc. SRI International. Zeisel SH (2012). "A brief history of...
60 KB (6,049 words) - 22:39, 3 June 2025
Reactome (category Biological databases)
pathway databases GeneNetwork Panther Pathways Pathway Commons KEGG (The Kyoto Encyclopedia of Genes and Genomes) BioCyc database collection BRENDA (The...
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techniques. The software system generates the BioCyc database collection, SRI's growing collection of genomic databases used by biologists to visualize genes...
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genomes LPSN lpsn.dsmz.de Straininfo of Achromobacter piechaudii "bioCyc Database Collection". Archived from the original on 2019-12-27. Retrieved 2013-07-12...
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2020-04-01. "EcoCyc: Encyclopedia of E. coli Genes and Metabolic Pathways". www.ecocyc.org. "BioCyc Pathway/Genome Database Collection". biocyc.org. "metaTIGER...
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Metabolic network modelling (section Databases)
enzyme of choice. BioCyc, EcoCyc, and MetaCyc: BioCyc Is a collection of 3,000 pathway/genome databases (as of Oct 2013), with each database dedicated to one...
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This is a list of websites that contain lists of chemicals, or databases of chemical information. There is further detail on the content of these and...
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Metabolome (section The Human Metabolome Database)
MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases". Nucleic Acids Research. 38 (Database issue):...
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Neuroscience Information Framework (category Online databases)
resources, including experimental, clinical, and translational neuroscience databases, knowledge bases, atlases, and genetic/genomic resources and provides...
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standard formats, including BioPAX, SBML and PSI-MI, and also enable data exchange with other pathway databases, such as the Cycs, KEGG and amaze, and molecular...
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Bioinformatics (redirect from Bio informatics)
Archive Used in Network Analysis: Metabolic Pathway Databases (KEGG, BioCyc), Interaction Analysis Databases, Functional Networks Used in design of synthetic...
133 KB (8,452 words) - 20:08, 29 May 2025
STRING (category Biochemistry databases)
HPRD, BIND, DIP, BioGRID, KEGG, Reactome, IntAct, EcoCyc, NCI-Nature Pathway Interaction Database, GO). Links are supplied to the originating data of the...
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BRENDA (category Enzyme databases)
reaction database, which clearly summarizes different spellings of known enzyme-catalyzed and spontaneous reactions from BRENDA, KEGG, MetaCyc and SABIO-RK...
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MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of Pathway/Genome Databases". Nucleic Acids Research. 42 (Database issue):...
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Biostatistics (redirect from BioStatistics)
in biology. It encompasses the design of biological experiments, the collection and analysis of data from those experiments and the interpretation of...
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Systems biology (section Tools and database)
Wai Kit; Paley, Suzanne M; Subhraveti, Pallavi (2019-07-19). "The BioCyc collection of microbial genomes and metabolic pathways". Briefings in Bioinformatics...
99 KB (10,413 words) - 02:02, 3 July 2025
Victor; López-Bigas, Núria (2005). "Expansion of the BioCyc collection of pathway/genome databases to 160 genomes". Nucleic Acids Research. 33 (19): 6083–6089...
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Mario (2012-01-01). "The MetaCyc database of metabolic pathways and enzymes and the BioCyc collection of pathway/genome databases". Nucleic Acids Research...
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TBro a transcriptome browser for de novo RNA-sequencing experiments. Vespa BioCyc Visualize RNA-seq data onto individual pathway diagrams, multi-pathway diagrams...
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and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928...
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MetaCyc database of metabolic pathways and enzymes and the Biocyc collection of pathway/genome databases". Nucleic Acids Research. 38 (Database issue):...
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and Expansion of the NIH Full-Length cDNA Project: The Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928...
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and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)". Genome Res. 14 (10B): 2121–7. doi:10.1101/gr.2596504. PMC 528928...
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the FLYTREE project. Abbreviations used in the cladogram: Cal=Calyptratae Cyc=Cyclorrhapha Ere=Eremoneura Mus=Muscomorpha Sch=Schizophora Flies are often...
87 KB (9,299 words) - 04:35, 28 June 2025
source code, v2.15, June 2000 - see /SOURCE/REALCODE.ASM for a large collection of pre-CPUID x86 CPU detection routines. Archived on 14 Mar 2023. "CPUID...
237 KB (13,489 words) - 16:18, 24 June 2025