A circular permutation is a relationship between proteins whereby the proteins have a changed order of amino acids in their peptide sequence. The result...

sorted result Cycles and fixed points Cyclic permutation of integer Cycle notation Circular permutation in proteins Fisher–Yates shuffle Note that the cycle...

Protein engineering is the process of developing useful or valuable proteins through the design and production of unnatural polypeptides, often by altering...

11 (9): 739–47. doi:10.1093/protein/11.9.739. PMID 9796821. Bliven S, Prlić A (2012). "Circular permutation in proteins". PLOS Comput. Biol. 8 (3): e1002445...

related to management of the public estate in the United Kingdom CE-CP, a circular permutation in proteins Country Extended Code Page, EBCDIC encodings...

in closely related plants) are the only proteins known to undergo a post-translational sequence arrangement known as Circular permutation in proteins...

valuable tool for the comparison of proteins with low sequence similarity, where evolutionary relationships between proteins cannot be easily detected by standard...

evolutionally-conserved protein domains found in saposin and related proteins (SAPLIP). Saposins are small lysosomal proteins that serve as activators...

local optimization. A circular layout may also be used to maximize the number of crossings. In particular, choosing a random permutation for the vertices causes...

relationship between proteins. Proteins with the same shapes but having little sequence or functional similarity are placed in different superfamilies...

represent circular permutations of the original. The T4 genome bears eukaryote-like intron sequences. The Shine-Dalgarno sequence GAGG dominates in virus...

jRCaMP1b use a circular permutation of the red fluorescent protein mRuby instead of GFP, while jRGECO1a is based on the red fluorescent protein mApple. Since...

a minor loss in precision if a permutation is drawn twice—or more frequently—for the efficiency of not having to track which permutations have already...

role in cellular activity; e.g. as structural proteins, motor proteins, enzymes, transcription factors, or links within biochemical pathways. protein complex...

Zacharias DA, Tsien RY (September 1999). "Circular permutation and receptor insertion within green fluorescent proteins". Proceedings of the National Academy...

proper saposin-like domain. This is due to a circular permutation of the N- and C-termini of the PSI, in which the termini are "swapped". This has led...

location on the circular genome. This is called a cyclic permutation. The genome is especially rich in Chi sequences recognized by the bacterial recombinase...

the coat proteins are produced, the capsid experiences self-assembly. Circular permutation exposes the exterior termini on the coat proteins, which cluster...

and Rep classes are evolutionarily related to one another through circular permutation. This means that they share a general fold, but the amino-terminal...

10 consecutive cassettes were ligated and cloned in E. coli on a plasmid and the correct permutation checked by sequencing. Multiplex PCR → 100kbp: 11...

Magnus, Holst, Anders and Pentti Kanerva (2008) Permutations as a Means to Encode Order in Word Space, In Proceedings of the 30th Annual Conference of the...

with Small Protein B (SmpB), Elongation Factor Tu (EF-Tu), and ribosomal protein S1. In trans-translation, tmRNA and its associated proteins bind to bacterial...

Periodogram Peirce's criterion Pensim2 – an econometric model Percentage point Permutation test – redirects to Resampling (statistics) Pharmaceutical statistics...

hybrid-pi model in discrete mathematics, a permutation Projection ϖ (a graphic variant, see pomega) represents: angular frequency of a wave, in fluid dynamics...

Intramolecular Processing and Substrate Hydrolysis in the N-Terminal Nucleophile Hydrolase hASRGL1 by Circular Permutation". ACS Chemical Biology. 7 (11): 1840–1847...

respectively) with a new fold resulting from gene duplication and circular permutation. The ZP module (residues P338-G581), whose ZP-N and ZP-C moieties...

Posters, IEEE Nicholson, T. A. J. (1968), "Permutation procedure for minimising the number of crossings in a network", Proceedings of the Institution...

242603899. PMC 139241. PMID 12477932. Ferreira GC, Cheltsov AV (2002). "Circular permutation of 5-aminolevulinate synthase as a tool to evaluate folding, structure...

"ARTEM: a method for RNA tertiary motif identification with backbone permutations, and its example application to kink-turn-like motifs". bioRxiv. doi:10...

than eliminating unlikely relationships, the latest studies add new permutations of internal molluscan relationships, even bringing the conchiferan hypothesis...