Apurinic/apyrimidinic (AP) endonuclease is an enzyme that is involved in the DNA base excision repair pathway (BER). Its main role in the repair of damaged...
12 KB (1,444 words) - 21:26, 18 January 2025
contain two AP endonucleases: endonuclease IV (endoIV) and exonuclease III (exoIII) while in eukaryotes, there is only one AP endonuclease. Repair of DNA...
25 KB (2,688 words) - 17:16, 23 May 2025
DNA-(apurinic or apyrimidinic site) lyase (redirect from AP lyase)
phage-T4 UV endonuclease; Micrococcus luteus UV endonuclease; AP site-DNA 5'-phosphomonoester-lyase; and X-ray endonuclease III. Since DNA AP lyase is a...
16 KB (1,723 words) - 11:04, 27 February 2025
Antiparallel Antisense Antisense RNA Antisense strand Antisense therapy AP endonuclease AP site Apert syndrome Apoptosis Applied genetics Arg Arrayed library...
33 KB (2,517 words) - 18:31, 3 September 2024
methylated bases, or uracil in DNA. The AP site can then be cleaved by an AP endonuclease, leaving 3'-hydroxyl and deoxyribose-5-phosphate termini (see DNA structure)...
8 KB (1,109 words) - 18:56, 31 May 2023
Base excision repair (section AP endonucleases)
specific damaged or inappropriate bases, forming AP sites. These are then cleaved by an AP endonuclease. The resulting single-strand break can then be processed...
29 KB (3,493 words) - 01:31, 15 January 2025
Deoxyribodipyrimidine endonucleosidase (redirect from T4-induced UV endonuclease)
DNA-glycosylase, endonuclease V, deoxyribonucleate pyrimidine dimer glycosidase, pyrimidine dimer DNA glycosylase, T4-induced UV endonuclease, PD-DNA glycosylase)...
2 KB (165 words) - 16:09, 22 May 2025
DNA synthesis. Direct physical interaction between this protein and AP endonuclease 1 during long-patch base excision repair provides coordinated loading...
23 KB (2,642 words) - 21:34, 20 February 2024
Deoxyribonuclease IV (redirect from E. coli endonuclease IV)
the endonuclease IV consists of several activities such as AP endonuclease, 3'-diesterase, 3'->5' exonuclease, and 3'phosphatase. The endonuclease IV is...
11 KB (1,301 words) - 22:29, 26 May 2025
Nuclease (section Endonucleases)
as an intermediary step in base excision repair. These AP sites are removed by AP endonucleases, which effect single strand breaks around the site. Nucleotide...
22 KB (2,538 words) - 09:39, 13 February 2025
to identify and repair such sites. Class II AP endonucleases cleave the phosphodiester backbone 5' to the AP site, thereby initiating a process known as...
11 KB (1,319 words) - 18:41, 13 August 2023
SNP genotyping (section Flap endonuclease)
to detect SNPs. SNP-RFLP makes use of the many different restriction endonucleases and their high affinity to unique and specific restriction sites. By...
37 KB (5,012 words) - 19:53, 31 October 2024
CRISPR system from Streptococcus pyogenes uses the protein Cas9, an endonuclease functioning with two small RNAs—crRNA and tracrRNA—to form a four-component...
115 KB (11,900 words) - 23:21, 29 May 2025
(CRISPR-associated protein 12a, previously known as Cpf1) is an RNA-guided endonuclease-exonuclease that forms an essential component of the CRISPR systems found...
22 KB (2,638 words) - 03:05, 25 May 2025
Endonuclease III-like protein 1 is an enzyme that in humans is encoded by the NTHL1 gene. As reviewed by Li et al., NTHL1 is a bifunctional DNA glycosylase...
10 KB (1,349 words) - 14:05, 29 March 2025
Doudna JA, Charpentier E (2012). "A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity". Science. 337 (6096): 816–821. Bibcode:2012Sci...
12 KB (1,421 words) - 00:22, 14 December 2022
short distance on either side of the site of damage. It then acts as an endonuclease to incise the damaged DNA strand on the 5' side of the damaged site....
30 KB (3,015 words) - 22:35, 29 May 2025
(DBD), double-strand breaks (DSBs) in target DNA by the restriction endonucleases (FokI and Cas), and the repair of DSBs through homology-directed recombination...
79 KB (9,365 words) - 19:52, 22 May 2025
DNA RNase activity 3' phosphatase activity AP endonuclease activity (later found to be called endonuclease II). Exonuclease IV adds a water molecule,...
14 KB (1,758 words) - 17:38, 24 May 2025
endonucleases and many phosphatases involved in intracellular signaling. AP endonuclease proteins EC 4.2.99.18, DNase I proteins EC 3.1.21.1, Synaptojanin,...
4 KB (347 words) - 15:01, 29 March 2022
Apurinic/apyrimidinic (AP) sites are a common form of DNA damage that inhibit DNA replication and transcription. AP endonuclease 1 (APEX1), an enzyme produced...
42 KB (5,016 words) - 08:39, 24 May 2025
glycosylase activity (EC) and AP lyase activity (EC). Examples include formamidopyrimidine-DNA glycosylases (Fpg; MutM) and endonuclease VIII (Nei). Formamidopyrimidine-DNA...
6 KB (738 words) - 01:15, 25 July 2024
Mung bean nuclease (redirect from Mung bean endonuclease)
at low salt concentration. Nuclease MB is a specific DNA and RNA exo-endonuclease which will degrade single-stranded extensions from the ends of DNA and...
5 KB (718 words) - 20:54, 18 December 2022
activity EC 3.2.2.- and AP lyase activity EC 4.2.99.18. Examples include formamidopyrimidine-DNA glycosylases (Fpg; MutM) and endonuclease VIII (Nei). Formamidopyrimidine-DNA...
6 KB (709 words) - 13:13, 31 August 2021
oligonucleotides, mismatch binding enzymes of the mutS family or specific endonucleases from bacteria or phages. Nevertheless, all these strategies increase...
61 KB (7,073 words) - 17:17, 23 May 2025
ChIP-sequencing, was utilized to map both; damage in AP sites, and the enzyme responsible for its repair, AP endonuclease 1 (APE1). Both of these genome-wide mapping...
95 KB (12,021 words) - 13:17, 23 May 2025
glycosylase, generating an abasic (AP) site. The resulting abasic site is then recognised by enzymes (AP endonucleases) that break a phosphodiester bond...
6 KB (708 words) - 21:07, 26 November 2024
Cyclin T1, a human gene GalNAc-T1, a human gene Ribonuclease T1, a fungal endonuclease TNM staging system, classification for a small cancer tumor T1, longitudinal...
5 KB (724 words) - 13:04, 13 May 2025
methylated cytosine. After an AP site is formed, AP endonuclease creates a nick in the phosphodiester backbone of the AP site that was formed when the...
41 KB (5,135 words) - 18:23, 6 February 2025
cell death. Apoptosis is characterized by the activation of endogenous endonucleases, particularly the caspase-3 activated DNase (CAD), with subsequent cleavage...
20 KB (2,230 words) - 02:48, 23 November 2024