The PRIDE (PRoteomics IDEntifications database) is a public data repository of mass spectrometry-based proteomics data, and is maintained by the European...

Protein Data Bank (PDB) Protein Information Resource (PIR) Proteomics Identifications Database (PRIDE) Proteopedia—The collaborative, 3D encyclopedia of...

Research Index Plant DNA C-values Database Plants for a Future Price guide ProBiS ProQuest Proteomics Identifications Database PsycINFO PubChem PubMed Central...

sequences can be found in a reference database such as the Proteomics Identifications Database. Proteogenomics helps eliminate this reliance on existing...

False-discovery Rate for Protein Identifications from Mascot Database Search Results". Molecular & Cellular Proteomics. 4 (6): 762–72. doi:10.1074/mcp...

Shotgun proteomics refers to the use of bottom-up proteomics techniques in identifying proteins in complex mixtures using a combination of high performance...

The Proteomics Standards Initiative (PSI) is a working group of the Human Proteome Organization. It aims to define data standards for proteomics to facilitate...

European Space Agency (ESA) unmanned spaceplane project Proteomics Identifications Database, or PRIDE Mississippi Pride, a professional American football...

in a single run. The major alternative workflow used in proteomics is called top-down proteomics where intact proteins are purified prior to digestion and/or...

The Trans-Proteomic Pipeline (TPP) is an open-source data analysis software for proteomics developed at the Institute for Systems Biology (ISB) by the...

resource to support genomic and proteomic research, and scientific studies. It contains protein sequences databases PIR was established in 1984 by the...

spectrometer, this is called "bottom-up proteomics". Shotgun proteomics is a variant of bottom up proteomics in which proteins in a mixture are digested...

certain to be spurious identifications, but we can't discriminate between true and false positives identified in the target database. FDR estimation was...

Protein Analysis System) servers that are a central resource for proteomics tools and databases. PIR, hosted by the National Biomedical Research Foundation...

(December 2007). "Viral proteomics: global evaluation of viruses and their interaction with the host". Expert Review of Proteomics. 4 (6): 815–829. doi:10...

Major developments include the following: Creation of GPMDB: a large proteomics database generated using GPM; Inclusion in the Human proteome project as a...

Slavov, Nikolai (January 2022). "Scaling Up Single-Cell Proteomics". Molecular & Cellular Proteomics. 21 (1): 100179. doi:10.1016/j.mcpro.2021.100179. PMC 8683604...

2012). "File formats commonly used in mass spectrometry proteomics". Molecular & Cellular Proteomics. 11 (12): 1612–21. doi:10.1074/mcp.R112.019695. PMC 3518119...

used in the small molecules mass spectra identification since the 1980s. In the early years of shotgun proteomics, pioneer investigations suggested that...

approaches: a digestion-free, top-down method and bottom-up proteomics. Top-down proteomics is seldom used to analyse ancient proteins due to analytical...

proteomics and genomics. This sort of databases summarize books, articles, book reviews, dissertations, and annotations about gene-disease databases....

proteins". Biochimica et Biophysica Acta (BBA) - Proteins and Proteomics. Medical Proteomics. 1854 (6): 592–600. doi:10.1016/j.bbapap.2014.10.011. PMC 5524126...

results table. Protein mass spectrometry Shotgun proteomics Top-down proteomics Bottom-up proteomics Clauser KR, Baker P, Burlingame AL (1999). "Role...

spectrum is reported as the best identification for this spectrum. Bottom-up proteomics Mascot (software) Shotgun proteomics Jimmy K. Eng, Ashley L. McCormack...

researchers in the world. His work is focused on developing tools and in proteomics and he specializes in mass spectrometry. He is best known for the development...

genetic variation, and explore gene function. Protein chips (also known as proteomics chips) are designed to detect and analyze proteins. These chips contain...

sets defines the field of proteomics, named by analogy to the related field of genomics. Key experimental techniques in proteomics include 2D electrophoresis...

systems for automated analysis of large-scale proteomics data. Subsequently, he served as the Director of Proteomics at Genomic Solutions, and as Staff Scientist...

additional evidence for protein identifications performed as above. The peptides matched during protein identification do not necessarily include the N-...

independent analysis and hyper reaction monitoring". Expert Review of Proteomics. 10 (6): 551–566. doi:10.1586/14789450.2013.858022. ISSN 1478-9450. PMID 24206228...