Binary Alignment Map (BAM) is the comprehensive raw data of genome sequencing; it consists of the lossless, compressed binary representation of the Sequence...

post-processing short DNA sequence read alignments in the SAM (Sequence Alignment/Map), BAM (Binary Alignment/Map) and CRAM formats, written by Heng Li...

an alignment section. The binary equivalent of a SAM file is a Binary Alignment Map (BAM) file, which stores the same data in a compressed binary representation...

efficient reference-based alternative to the Sequence Alignment Map (SAM) and Binary Alignment Map (BAM) file formats. It optionally uses a genomic reference...

subclades downstreaming from G-L91; however, an analysis of his Binary Alignment Map file revealed that he belongs to the L166 and FGC5672 subclades below...

structures, genomes, and PubMed records. BAM – Binary Alignment/Map format (compressed SAM format) BCF – Binary compressed VCF format BED – The browser extensible...

attenuation monitoring, for measurement of particle content in gas flow Binary Alignment Map, the comprehensive raw data from genome sequencing (includes BAM...

structure alignment is the way data is arranged and accessed in computer memory. It consists of three separate but related issues: data alignment, data structure...

input, but some programs, such as cuffdiff, will accept binary alignment map format read alignments as input. The final outputs of these analyses are gene...

physical address (also real address, or binary address), is a memory address that is represented in the form of a binary number on the address bus circuitry...

In computing and electronic systems, binary-coded decimal (BCD) is a class of binary encodings of decimal numbers where each digit is represented by a...

In computer science, a red–black tree is a self-balancing binary search tree data structure noted for fast storage and retrieval of ordered information...

Manifold alignment is a class of machine learning algorithms that produce projections between sets of data, given that the original data sets lie on a...

Chromatograms: ABIF (.abi), SCF (.scf) Short reads: Sequence Alignment/Map(SAM) (.sam), binary version of SAM (.bam), ACE (.ace), FASTQ (.fastq) Phylogenetic...

construct a binary similarity matrix. Smith–Waterman algorithm is used to construct a local alignment matrix H in the Dynamic Programming Local Alignment. Finally...

settings. Multiple binary digits can be set to one in the flags to identify any information or settings that apply to the binary. Now the load commands...

detect exoplanets, study limb darkening in distant stars, constrain the binary star population, and constrain the structure of the Milky Way's disk. Microlensing...

2170±22, and 2290±24 light-years from the Sun, with the second being a binary star. M73 was discovered by Charles Messier in 1780 who originally described...

Hadamard transform can be defined in two ways: recursively, or by using the binary (base-2) representation of the indices n and k. Recursively, we define the...

bioinformatics, alignment-free sequence analysis approaches to molecular sequence and structure data provide alternatives over alignment-based approaches...

and has support for headers, footers, tables, different fonts, text alignment, and other features common in word processors. The built-in spellchecker...

search. Uniform binary search: an optimization of the classic binary search algorithm Eytzinger binary search: cache friendly binary search algorithm...

notation binary function binary fuse filter binary GCD algorithm binary heap binary insertion sort binary knapsack problem binary priority queue binary relation...

set the minimum ratio of alignment blocks or exons that must map and set; if an exon is not mapped, use the closest mapped base. The UCSC Genome Browser...

means that any programming language that can write 80-byte fixed-format binary files (basically anything including COBOL and FORTRAN, not just Assembler)...

The definition given above includes binary trans men and trans women and may also include people who are non-binary or genderqueer. Other related groups...

protein contact map represents the distance between all possible amino acid residue pairs of a three-dimensional protein structure using a binary two-dimensional...

structure used to store and retrieve strings from a dictionary or set. Unlike a binary search tree, nodes in a trie do not store their associated key. Instead...

parenthood; examples include TreeMaps, fractal maps, and Euler diagrams: Layered "icicle" diagrams that use alignment/adjacency. Lists or diagrams that...

story. A player's choices in the plot can impact the political alignment of the entire map. If players become strong enough, they can demand tribute from...