• A Gap penalty is a method of scoring alignments of two or more sequences. When aligning sequences, introducing gaps in the sequences can allow an alignment...
    19 KB (2,483 words) - 14:32, 2 July 2024
  • Thumbnail for Smith–Waterman algorithm
    in EMBOSS Water are: gap opening = 10, gap extension = 0.5. Here we discuss two common strategies for gap penalty. See Gap penalty for more strategies...
    36 KB (4,666 words) - 01:55, 18 March 2025
  • Thumbnail for Needleman–Wunsch algorithm
    arbitrary gap penalization formulas: A penalty factor, a number subtracted for every gap made, may be assessed as a barrier to allowing the gap. The penalty factor...
    25 KB (3,242 words) - 21:05, 5 May 2025
  • Thumbnail for Sequence alignment
    standard linear gap costs are affine gap costs. Here two different gap penalties are applied for opening a gap and for extending a gap. Typically the former...
    56 KB (6,913 words) - 09:31, 31 May 2025
  • differential invariants under the action of the special affine group Affine gap penalty, the most widely used scoring function used for sequence alignment, especially...
    2 KB (284 words) - 11:16, 5 November 2021
  • Thumbnail for Multiple sequence alignment
    For proteins, this method usually involves two sets of parameters: a gap penalty and a substitution matrix assigning scores or probabilities to the alignment...
    49 KB (6,213 words) - 12:51, 15 September 2024
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    the United States, capital punishment (also known as the death penalty) is a legal penalty in 27 states (of which two, Oregon and Wyoming, do not currently...
    215 KB (21,748 words) - 20:13, 17 June 2025
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    men’s outcomes. These penalties are central to understanding gender inequality in the labor market, explaining most of the earnings gap in many high-income...
    33 KB (3,713 words) - 17:41, 26 May 2025
  • Studies indicate that mothers face a per-child wage penalty that exacerbates the gender pay gap. In addition to lower pay, mothers are often viewed as...
    30 KB (3,879 words) - 17:07, 13 May 2025
  • Gap Open Penalty – A gap penalty is a negative score assigned to a gap in an alignment. It can be constant, where a fixed cost is charged for the gap...
    18 KB (2,079 words) - 05:51, 23 February 2025
  • salary. The reasons for the gap link to legal, social and economic factors. These include having children (motherhood penalty vs. fatherhood bonus), parental...
    124 KB (14,625 words) - 03:22, 9 June 2025
  • Thumbnail for Clustal
    symbols should be ignored for DNA/RNA alignments. The gap opening penalty and gap extension penalty parameters can be adjusted by the user. The original...
    26 KB (2,878 words) - 09:16, 3 December 2024
  • The gender pay gap in the United States is a measure comparing the earnings of men and women in the workforce. The average female annual earnings is around...
    127 KB (14,905 words) - 18:22, 1 June 2025
  • improvement for biological local pairwise sequence alignment using the affine gap penalty model. It was written by Ahmed Moustafa. Sequence alignment software...
    751 bytes (75 words) - 06:16, 14 June 2022
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    likely an underestimate. Political concerns in China include the growing gap between rich and poor and government corruption. Nonetheless, international...
    331 KB (29,790 words) - 14:55, 9 June 2025
  • addresses gender gaps in life expectancy, education, and income. It uses an "inequality aversion" penalty, which creates a development score penalty for gender...
    28 KB (1,230 words) - 00:17, 25 October 2024
  • K {\displaystyle \mathrm {K} } depend upon the substitution matrix, gap penalties, and sequence composition (the letter frequencies). m ′ {\displaystyle...
    39 KB (4,974 words) - 03:38, 25 May 2025
  • Thumbnail for Kristi Noem
    Johnson that would designate over 48,000 acres (190 km2) of the Buffalo Gap National Grassland as protected wilderness. She supports the designation...
    211 KB (16,620 words) - 00:01, 18 June 2025
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    and he is as smart as anybody playing the game right now." After a 12-year gap, James rejoined the national team on the 2024 Olympic squad in Paris as Team...
    412 KB (36,028 words) - 22:06, 18 June 2025
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    for the equipment. The slot gaps for the rear wing between the two modes of the DRS have been changed, with the minimum gap reduced. It has been shrunk...
    100 KB (7,268 words) - 11:31, 18 June 2025
  • Branch of Road to communicate therewith. (Repealed by Birmingham and Watford Gap Road Act 1826 (c.xxii)) Roads and Bridges in Dumbarton Act 1807 (repealed)...
    133 KB (1,566 words) - 15:06, 12 May 2025
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    Pay Act by underpaying its female employees. The lawsuit cited the wage gap was around $17,000 and that Google locked women into lower career tracks...
    262 KB (21,972 words) - 23:48, 18 June 2025
  • Thumbnail for List of bills in the 119th United States Congress
    other emerging or advanced technologies to enhance, or address capability gaps in, border security operations, and for other purposes. H.R. 997 February...
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    PISA results suggest improvements in education quality. There is still a gap with OECD countries. Significant challenges include differences in student...
    280 KB (25,157 words) - 16:16, 11 June 2025
  • December 11, 2014. Junn, Jane; Masuoka, Natalie (2020). "The Gender Gap Is a Race Gap: Women Voters in US Presidential Elections". Perspectives on Politics...
    336 KB (28,784 words) - 07:18, 18 June 2025
  • pensioner crest to be old-fashioned, he insisted that it be replaced. A stop-gap badge which comprised the initials C.F.C. was adopted for a year. In 1953...
    174 KB (14,149 words) - 09:22, 12 June 2025
  • Thumbnail for 2024–25 Manchester City F.C. season
    Champions League. City began the season by defeating Manchester United 7–6 on penalties after a 1–1 draw in regular time on 10 August to win the FA Community...
    166 KB (7,460 words) - 19:21, 18 June 2025
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    the third race to take his fifth pole and win of the year, expanding his gap to 40 points from nearest rival Nikita Johnson. During race 1 of the Teretonga...
    67 KB (3,941 words) - 05:55, 13 June 2025
  • Thumbnail for 1994 FIFA World Cup
    World Cup. Brazil was crowned the winner after defeating Italy 3–2 in a penalty shootout at the Rose Bowl in Pasadena, California, near Los Angeles, after...
    120 KB (9,907 words) - 01:29, 18 June 2025
  • earlier. Despite growing competition, criticism remains over the financial gap between elite clubs and the rest of the league. Manchester City's 2011–12...
    243 KB (18,365 words) - 09:46, 14 June 2025