Protein Data Bank (PDB) file format is a textual file format describing the three-dimensional structures of molecules held in the Protein Data Bank,...
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chemical file format is a type of data file which is used specifically for depicting molecular data. One of the most widely used is the chemical table file format...
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The Protein Data Bank (PDB) is a database for the three-dimensional structural data of large biological molecules such as proteins and nucleic acids, which...
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list of file formats used by computers, organized by type. Filename extension is usually noted in parentheses if they differ from the file format's name...
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PDB file format. mmCIF is intended as an alternative to the Protein Data Bank (PDB) format and is now the default format used by the Protein Data Bank. mmCIF...
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Heteroatom (section Proteins)
specialised contexts. In the description of protein structure, in particular in the Protein Data Bank file format, a heteroatom record (HETATM) describes...
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intended as an successor to the Protein Data Bank (PDB) format. It is now the default format used by the Protein Data Bank. Also closely related is Crystallographic...
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Chimera Bsoft Coot MOE MTZ (file format) MRC (file format) EZD (file format) Chemical file format Protein Data Bank (file format) Voxel - one way of presenting...
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Brigade, a former Iraqi organization Protein Data Bank, a biological molecule database Protein Data Bank (file format) Potato dextrose broth, a microbiological...
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and biochemistry, the FASTA format is a text-based format for representing either nucleotide sequences or amino acid (protein) sequences, in which nucleotides...
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Protein Data Bank (wwPDB) is an organization that maintains the archive of macromolecular structure. Its mission is to maintain a single Protein Data...
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order number of the structure files (i.e., Column 23-26 in Protein Data Bank (file format)). When comparing two protein structures that have different...
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format (.pdb) is the legacy textual file format used to store information of three-dimensional structures of macromolecules used by the Protein Data Bank...
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Crystallographic Information File International Union of Crystallography Protein Data Bank (file format) CrystalExplorer Clare F., Macrae (28 February 2006). "Mercury:...
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Structure validation (category Protein methods)
EF, Brice MD, Rodgers JR, et al. (May 1977). "The Protein Data Bank: a computer-based archival file for macromolecular structures". Journal of Molecular...
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source Protein Segment Finder, a search engine for the Protein Data Bank Protein structure file for molecular dynamics, a chemical file format Polysulfone...
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mxd, a file format for map data supported by ArcMap Minoxidil, a medicine used to treat high blood pressure and hair loss, by Protein Data Bank ligand...
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alphabetical list of filename extensions contains extensions of notable file formats used by multiple notable applications or services. Contents !$@ 0-9 A...
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BioJava (section Protein structure modules)
Protein Data Bank (PDB) file, interacting with Jmol and many more. This application programming interface (API) provides various file parsers, data models...
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Resonance Data Bank (BioMagResBank or BMRB) is an open access repository of nuclear magnetic resonance (NMR) spectroscopic data from peptides, proteins, nucleic...
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calculation. By definition, Engine reads only Protein Data Bank (file format) atomic configuration files and handles other definitions and attributes....
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alphabetical list of filename extensions contains extensions of notable file formats used by multiple notable applications or services. Contents !$@ 0-9 A...
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available under the BSD license. PDB2PQR prepares the protein structure files from Protein Data Bank for use with APBS. The preparation steps include, but...
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used to visualize molecules, especially proteins although it can also represent other types of 3-dimensional data (such as geometric figures, social networks...
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appropriate public databases (e.g., GenBank; the EMBL Nucleotide Sequence Database; DNA Database of Japan; the Protein Data Bank; and Swiss-Prot). Accession numbers...
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Application Framework, a tool by SAP AG Core Audio Format, a file format from Apple for storing audio data Coarray Fortran, a parallel extension to Fortran...
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narrowly focused, are frequently modified, or use custom versions of common file formats. Advantages of sequence profiling tools include the ability to use multiple...
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UGENE (section Supported biological data formats)
structure viewer for files in Protein Data Bank (PDB) and Molecular Modeling Database (MMDB) formats, anaglyph view support Predict protein secondary structure...
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Molecular Evolutionary Genetics Analysis (category Data and information visualization software)
the alignment session in either MEGA or FASTA format. Trace Data File Viewer/Editor ― The Trace Data File Viewer/Editor has many functionalities in the...
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reference files by their stream numbers, rather than by their public URLs Biological Dynamics Markup Language (BDML) is an XML format for quantitative data describing...
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