Guide RNA (gRNA) or single guide RNA (sgRNA) is a short sequence of RNA that functions as a guide for the Cas9-endonuclease or other Cas-proteins that...
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Cas9 (section Interactions with sgRNA)
the 20 nucleotide spacer region of the guide RNA (gRNA). If the DNA substrate is complementary to the guide RNA, Cas9 cleaves the invading DNA. In this...
59 KB (7,257 words) - 05:11, 23 May 2025
CRISPR gene editing (section RNA editing)
system. By delivering the Cas9 nuclease complexed with a synthetic guide RNA (gRNA) into a cell, the cell's genome can be cut at a desired location, allowing...
177 KB (20,524 words) - 22:37, 29 May 2025
nucleolar RNAs (snoRNAs) are a class of small RNA molecules that primarily guide chemical modifications of other RNAs, mainly ribosomal RNAs, transfer RNAs and...
31 KB (3,892 words) - 08:04, 7 October 2024
CRISPR activation (section Guide RNA)
See: Guide RNA, CRISPR A small guide RNA (sgRNA), or gRNA is an RNA with around 20 nucleotides used to direct Cas9 or dCas9 to their targets. gRNAs contain...
22 KB (2,739 words) - 08:03, 1 April 2025
well as stability of RNAs, and has been linked with human diseases. RNA editing has been observed in some tRNA, rRNA, mRNA, or miRNA molecules of eukaryotes...
61 KB (7,437 words) - 00:53, 7 March 2025
Perturb-seq (category RNA sequencing)
each guide RNA to allow for all perturbations to be pooled together and later deconvoluted, with assignment of each phenotype to a specific guide RNA. Droplet-based...
22 KB (2,704 words) - 12:10, 9 May 2025
Prime editing (section Development of epegRNAs)
information that replaces the targeted sequence. The pegRNA consists of an extended single guide RNA (sgRNA) containing a primer binding site (PBS) and a reverse...
26 KB (3,062 words) - 21:55, 25 May 2025
ribonucleic acid (RNA) molecules, microRNA (miRNA) and small interfering RNA (siRNA), are central to components to the RNAi pathway. Once mRNA is degraded,...
140 KB (15,409 words) - 15:05, 22 May 2025
Cas12a (CRISPR-associated protein 12a, previously known as Cpf1) is an RNA-guided endonuclease-exonuclease that forms an essential component of the CRISPR...
22 KB (2,638 words) - 03:05, 25 May 2025
TIGR-Tas (category RNA)
TIGR-Tas (Tandem Interspaced Guide RNA-associated proteins) is a family of RNA-guided DNA-targeting systems discovered in prokaryotes and their viruses...
11 KB (1,021 words) - 06:56, 31 May 2025
(snRNPs or snurps). ScaRNAs guide the modification (methylation and pseudouridylation) of RNA polymerase II transcribed spliceosomal RNAs U1, U2, U4, U5 and...
6 KB (605 words) - 06:58, 12 September 2022
The RNA world is a hypothetical stage in the evolutionary history of life on Earth in which self-replicating RNA molecules proliferated before the evolution...
95 KB (10,989 words) - 22:24, 22 May 2025
CRISPR (category Non-coding RNA)
is an RNA-guided RNA endonuclease, which means that it does not cleave DNA, but only single-stranded RNA. Cas13 is guided by its crRNA to a ssRNA target...
115 KB (11,900 words) - 23:21, 29 May 2025
Protospacer adjacent motif (section GUIDE-Seq)
CRISPR-associated nuclease such as Cas9 attaches to a tracrRNA–crRNA complex, which guides Cas9 to the invading protospacer sequence. But Cas9 will not...
12 KB (1,421 words) - 00:22, 14 December 2022
transfer RNA (tRNA), microRNA (miRNA), small interfering RNA (siRNA), small nucleolar RNA (snoRNAs), Piwi-interacting RNA (piRNA), tRNA-derived small RNA (tsRNA)...
65 KB (7,626 words) - 20:44, 25 May 2025
platforms and bioinformatics tools used to facilitate the design of guide RNAs (gRNAs) for use with the CRISPR/Cas gene editing system. The CRISPR/Cas (clustered...
16 KB (1,283 words) - 21:43, 2 January 2025
Guilhem Faure (section mRNA and Protein Structure)
for leading the discovery of Tandem Interspaced Guide RNA (TIGR-Tas) systems, a novel class of RNA-guided DNA-targeting proteins found in prokaryotes and...
11 KB (1,157 words) - 21:33, 27 May 2025
for the different types of RNA are listed and explained. List of cis-regulatory RNA elements RNA: Types of RNA Non-coding RNA Gribaldo S, Brochier-Armanet...
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Off-target genome editing (section GUIDE-Seq)
found that greater than 50% of RNA-guided endonuclease-induced mutations were not occurring on-target. The Cas9 guide RNA (gRNA) recognizes a 20 bp target...
55 KB (7,122 words) - 04:03, 28 April 2025
CRISPR systems crRNA and tracrRNA (trans-activating CRISPR RNA) can form a complex known as the guide RNA or gRNA. The crRNA within the gRNA is what matches...
10 KB (1,149 words) - 21:43, 2 January 2025
difficult, if not impossible, to retarget. An RNA-guided endonuclease (e.g., Cas9 or Cas12a) and its guide RNA, which can be easily altered to set the target...
47 KB (5,126 words) - 07:52, 25 May 2025
CRISPR-Cas9 gene editing system, coupled with libraries of single guide RNAs (sgRNAs), which are designed to target every gene in the genome. Over recent...
55 KB (6,172 words) - 00:49, 29 May 2025
Transcription (biology) (redirect from RNA transcription)
RNA for the purpose of gene expression. Some segments of DNA are transcribed into RNA molecules that can encode proteins, called messenger RNA (mRNA)...
58 KB (6,898 words) - 13:44, 24 May 2025
CRISPR-Cas9 system consists of an enzyme called Cas9 and a special piece of guide RNA (gRNA). Cas9 acts as a pair of ‘molecular scissors’ that can cut the DNA...
43 KB (6,483 words) - 00:50, 29 May 2025
technology, enables precise RNA targeting and manipulation without altering DNA. Unlike DNA-editing Cas9, Cas13a uses a single RNA-guided endonuclease to bind...
9 KB (1,254 words) - 06:39, 23 May 2025
Central dogma of molecular biology (redirect from DNA makes RNA makes protein)
in RNA silencing. RNA editing, in which an RNA sequence is altered by a complex of proteins and a "guide RNA", could also be seen as an RNA-to-RNA transfer...
23 KB (2,707 words) - 11:19, 25 May 2025
Piwi (section Role in RNA interference)
solved. Piwi proteins are RNA-binding proteins with 2 or 3 domains: The N-terminal PAZ domain binds the 3'-end of the guide RNA; the middle MID domain binds...
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levels. Using single-stranded RNA (ssRNA) fragments, such as microRNA (miRNA), or double-stranded small interfering RNA (siRNA), the complex functions as...
36 KB (3,842 words) - 17:13, 25 November 2024
the liver a two-part genome editing system: guide RNA specific to the disease-causing gene and messenger RNA that encodes the Cas9 enzyme, which carries...
18 KB (1,662 words) - 16:31, 12 February 2025