Project. The SAM format consists of a header and an alignment section. The binary equivalent of a SAM file is a Binary Alignment Map (BAM) file, which stores...
14 KB (1,100 words) - 13:02, 30 January 2024
reference-based alternative to the Sequence Alignment Map (SAM) and Binary Alignment Map (BAM) file formats. It optionally uses a genomic reference to describe...
8 KB (577 words) - 00:51, 7 May 2025
list of file formats used by computers, organized by type. Filename extension is usually noted in parentheses if they differ from the file format's name...
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and analysis tools that work with SAM/BAM click here. FASTQ format SAM format SAMtools CRAM format List of file formats for molecular biology Compression...
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ZIP is an archive file format that supports lossless data compression. A ZIP file may contain one or more files or directories that may have been compressed...
58 KB (6,739 words) - 07:08, 9 June 2025
packages' master control file format". manpages.debian.org. Retrieved 2017-04-23. "Debian Policy Manual Chapter 5 - Control files and their fields". debian...
16 KB (1,326 words) - 03:04, 19 March 2025
machine SAm, an unbarred Magellanic spiral galaxy SAM (file format) or Sequence Alignment Map, a data format used in bioinformatics Sam (text editor) SAM Coupé...
7 KB (831 words) - 17:39, 2 May 2025
OpenDocument (redirect from Open document format)
The Open Document Format for Office Applications (ODF), also known as OpenDocument, standardized as ISO 26300, is an open file format for word processing...
56 KB (4,489 words) - 04:13, 12 May 2025
SAMtools (redirect from BAM format)
read alignments in the SAM (Sequence Alignment/Map), BAM (Binary Alignment/Map) and CRAM formats, written by Heng Li. These files are generated as output...
11 KB (1,395 words) - 09:07, 4 April 2025
Security Account Manager (redirect from SAM file)
The Security Account Manager (SAM) is a database file in Windows NT, Windows 2000, Windows XP, Windows Vista, Windows 7, 8.1, 10 and 11 that stores users'...
8 KB (1,006 words) - 16:27, 24 November 2024
is high, this leads to a high compression ratio. Unlike the SAM/BAM formats, FASTQ files do not specify a reference genome. Alignment-based FASTQ compressors...
31 KB (3,685 words) - 13:54, 1 May 2025
Variant Call Format or VCF is a standard text file format used in bioinformatics for storing gene sequence or DNA sequence variations. The format was developed...
13 KB (1,061 words) - 23:05, 3 April 2025
multiple-sequence FASTA format, or multi-FASTA format, would be obtained by concatenating several single-sequence FASTA files in one file. This does not imply...
26 KB (2,148 words) - 14:45, 24 May 2025
Polyglot (computing) (redirect from Polyglot file)
file) written in a valid form of multiple programming languages or file formats. The name was coined by analogy to multilingualism. A polyglot file is...
28 KB (2,936 words) - 02:15, 2 June 2025
alphabetical list of filename extensions contains extensions of notable file formats used by multiple notable applications or services. Contents !$@ 0-9 A...
48 KB (1,505 words) - 07:28, 10 June 2025
and brand, firstly under SAM Computers Limited and then in November 1992 under West Coast Computers, a company spun from Format Publications which lasted...
27 KB (2,777 words) - 15:26, 21 May 2025
Sam Burke and Maximilian "Twitch" Williams are two fictional NYPD homicide detectives created by Todd McFarlane. Sam and Twitch were originally featured...
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FASTQ format. There is no standard file extension for a Pileup file, but .msf (multiple sequence file), .pup and .pileup are used. Variant Call Format FASTQ...
6 KB (575 words) - 02:25, 27 December 2023
Ogg (redirect from Ogg Media File)
files whose content used the Ogg container format. Since then, the Xiph.Org Foundation recommends that .ogg only be used for Ogg Vorbis audio files....
34 KB (3,518 words) - 23:59, 23 April 2025
endian, or number of channels). Raw files can have a wide range of file extensions, common ones being .raw, .pcm, or .sam. They can also have no extension...
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Maildir (category Email storage formats)
Maildir e-mail format is a common way of storing email messages on a file system, rather than in a database. Each message is assigned a file with a unique...
18 KB (2,006 words) - 19:21, 23 September 2024
portal LibTIFF is a library for reading and writing Tag Image File Format (abbreviated TIFF) files. The set also contains command line tools for processing...
4 KB (353 words) - 16:15, 3 April 2025
Atom (web standard) (redirect from Atom (file format))
name Atom applies to a pair of related Web standards. The Atom Syndication Format is an XML language used for web feeds, while the Atom Publishing Protocol...
20 KB (2,206 words) - 12:26, 10 April 2025
Btrfs (redirect from Btfrs file system)
"butter F S", "b-tree F S", or "B.T.R.F.S.") is a computer storage format that combines a file system based on the copy-on-write (COW) principle with a logical...
63 KB (6,484 words) - 12:52, 16 May 2025
Spynet (redirect from Sam (Spynet))
to evaluate and plan. The mission will then lead to Sam calling up a training video or NET file archive interview, relating to the topic that the mission...
6 KB (878 words) - 23:52, 13 February 2024
Windows Registry (redirect from Reg file)
much more efficiently with a binary format, it may be read from or written to more quickly than a text INI file. Furthermore, strongly typed data can...
70 KB (8,388 words) - 07:13, 24 March 2025
File Explorer, previously known as Windows Explorer, is a file manager application and default desktop environment that is included with releases of the...
64 KB (6,811 words) - 03:06, 1 June 2025
proper format in order to use that program. Various file conversion programs exist because people need to convert their files to a different format in order...
8 KB (1,194 words) - 18:58, 18 February 2025
Google Docs (section Supported file formats)
control how frequently revisions are saved. Files can be exported to a user's local computer in a variety of formats (ODF, HTML, PDF, RTF, Text, Office Open...
33 KB (3,489 words) - 08:16, 14 June 2025
Deflate (section Stream format)
(stylized as DEFLATE, and also called Flate) is a lossless data compression file format that uses a combination of LZ77 and Huffman coding. It was designed by...
29 KB (3,192 words) - 22:57, 24 May 2025