molecular biology, protein threading, also known as fold recognition, is a method of protein modeling which is used to model those proteins which have the...

Threading may refer to: Thread (computing), a programming technique Threading (epilation), a hair removal method Threading (manufacturing), the process...

Protein structure prediction is the inference of the three-dimensional structure of a protein from its amino acid sequence—that is, the prediction of its...

prediction of protein structure from its sequence have been developed. Ab initio prediction methods use just the sequence of the protein. Threading and homology...

Supporting his hypothesis, Blobel discovered that many proteins have a short amino acid sequence at one end that functions like a postal code specifying...

[page needed] Protein threading can be used when a reliable homologue for the query sequence cannot be found. This method begins by obtaining a query sequence and...

signal sequence except that it is not cleaved. They are a kind of target peptide. Signal peptides function to prompt a cell to translocate the protein, usually...

remote homology recognition and protein threading techniques, RaptorX is able to regularly generate reliable protein models when the widely used PSI-BLAST...

homology modeling fold recognition (also called protein threading; note that this naming is incorrect as threading is a method) de novo structure prediction...

understand the organizational principles within nucleic acid and protein sequences. Image and signal processing allow extraction of useful results from...

Hsp100. Hsp100 proteins have aromatic pore loops that are used for threading activity to disentangle single polypeptides. This threading activity can be...

in protein structure prediction, including homology modeling, protein threading, ab initio methods, secondary structure prediction, and transmembrane...

as protein fold recognition (threading), a method of protein modeling, which is used to model those proteins which have the same fold as proteins of known...

(May 1993). "An empirical energy function for threading protein sequence through the folding motif". Proteins. 16 (1): 92–112. doi:10.1002/prot.340160110...

gene is a sequence of nucleotides in DNA that is transcribed to produce a functional RNA. There are two types of molecular genes: protein-coding genes...

researchers can use protein threading software, such as RAPTOR to create a highly reliable model of the protein. Protein threading is more effective than...

conserved than sequence and thus sequence-based modeling may not be the most accurate way to predict protein structures. Threading bases structural modeling...

(BFD) of 65,983,866 protein families, represented as MSAs and hidden Markov models (HMMs), covering 2,204,359,010 protein sequences from reference databases...

from amino acid sequences. It detects structure templates from the Protein Data Bank by a technique called fold recognition (or threading). The full-length...

function as molecular messengers, carrying sequence information encoded in the DNA genome to the ribosomes where protein synthesis occurs. The primary products...

methods for protein structure prediction having been cited over 1,500 times. Like other remote homology recognition techniques (see protein threading), it is...

Under the genetic code, these RNA strands specify the sequence of amino acids within proteins in a process called translation. Within eukaryotic cells...

homologs. The optimal "threading" of a protein sequence onto a known structure and the production of an optimal multiple sequence alignment have been shown...

deleted from a DNA or RNA sequence of an organism's genome. Point mutations have a variety of effects on the downstream protein product—consequences that...

introduce greater variability of protein sequences translated from a single gene, allowing multiple related proteins to be generated from a single gene...

first to determine the sequence of a gene: the gene for Bacteriophage MS2 coat protein. Fiers' group expanded on their MS2 coat protein work, determining the...

protein structure prediction refers to an algorithmic process by which protein tertiary structure is predicted from its amino acid primary sequence....

comparative modeling of protein, refers to constructing an atomic-resolution model of the "target" protein from its amino acid sequence and an experimental...

molecules and use the RNA's sequence of nucleotides to determine the sequence of amino acids needed to generate a protein. Amino acids are selected and...

comparing primary biological sequence information such as the nucleotide sequences of DNA or RNA or the amino acid sequences of proteins. BLAST programs enable...