• A Gap penalty is a method of scoring alignments of two or more sequences. When aligning sequences, introducing gaps in the sequences can allow an alignment...
    19 KB (2,483 words) - 14:32, 2 July 2024
  • Thumbnail for Smith–Waterman algorithm
    in EMBOSS Water are: gap opening = 10, gap extension = 0.5. Here we discuss two common strategies for gap penalty. See Gap penalty for more strategies...
    36 KB (4,666 words) - 01:55, 18 March 2025
  • Thumbnail for Needleman–Wunsch algorithm
    arbitrary gap penalization formulas: A penalty factor, a number subtracted for every gap made, may be assessed as a barrier to allowing the gap. The penalty factor...
    25 KB (3,242 words) - 21:05, 5 May 2025
  • Thumbnail for Sequence alignment
    standard linear gap costs are affine gap costs. Here two different gap penalties are applied for opening a gap and for extending a gap. Typically the former...
    56 KB (6,913 words) - 09:31, 31 May 2025
  • differential invariants under the action of the special affine group Affine gap penalty, the most widely used scoring function used for sequence alignment, especially...
    2 KB (284 words) - 11:16, 5 November 2021
  • Thumbnail for Multiple sequence alignment
    For proteins, this method usually involves two sets of parameters: a gap penalty and a substitution matrix assigning scores or probabilities to the alignment...
    49 KB (6,213 words) - 12:51, 15 September 2024
  • Thumbnail for Child penalties
    men’s outcomes. These penalties are central to understanding gender inequality in the labor market, explaining most of the earnings gap in many high-income...
    33 KB (3,713 words) - 17:41, 26 May 2025
  • Thumbnail for Capital punishment in the United States
    the United States, capital punishment (also known as the death penalty) is a legal penalty in 27 states (of which two, Oregon and Wyoming, do not currently...
    215 KB (21,748 words) - 20:13, 17 June 2025
  • Studies indicate that mothers face a per-child wage penalty that exacerbates the gender pay gap. In addition to lower pay, mothers are often viewed as...
    30 KB (3,879 words) - 17:07, 13 May 2025
  • Gap Open Penalty – A gap penalty is a negative score assigned to a gap in an alignment. It can be constant, where a fixed cost is charged for the gap...
    18 KB (2,079 words) - 05:51, 23 February 2025
  • salary. The reasons for the gap link to legal, social and economic factors. These include having children (motherhood penalty vs. fatherhood bonus), parental...
    124 KB (14,625 words) - 03:22, 9 June 2025
  • The gender pay gap in the United States is a measure comparing the earnings of men and women in the workforce. The average female annual earnings is around...
    127 KB (14,905 words) - 18:22, 1 June 2025
  • improvement for biological local pairwise sequence alignment using the affine gap penalty model. It was written by Ahmed Moustafa. Sequence alignment software...
    751 bytes (75 words) - 06:16, 14 June 2022
  • K {\displaystyle \mathrm {K} } depend upon the substitution matrix, gap penalties, and sequence composition (the letter frequencies). m ′ {\displaystyle...
    39 KB (4,974 words) - 03:38, 25 May 2025
  • Thumbnail for Clustal
    symbols should be ignored for DNA/RNA alignments. The gap opening penalty and gap extension penalty parameters can be adjusted by the user. The original...
    26 KB (2,878 words) - 09:16, 3 December 2024
  • Thumbnail for Kristi Noem
    Johnson that would designate over 48,000 acres (190 km2) of the Buffalo Gap National Grassland as protected wilderness. She supports the designation...
    211 KB (16,620 words) - 00:01, 18 June 2025
  • Thumbnail for Arvid Lindblad
    the third race to take his fifth pole and win of the year, expanding his gap to 40 points from nearest rival Nikita Johnson. During race 1 of the Teretonga...
    67 KB (3,941 words) - 05:55, 13 June 2025
  • Thumbnail for Jeju Air Flight 2216
    [Disaster in the Absence of a 'Control Tower'... Concerns Over Disaster Response Gap]. YTN (in Korean). Archived from the original on 30 December 2024. Retrieved...
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  • Thumbnail for LeBron James
    and he is as smart as anybody playing the game right now." After a 12-year gap, James rejoined the national team on the 2024 Olympic squad in Paris as Team...
    412 KB (36,028 words) - 16:02, 18 June 2025
  • Thumbnail for 1994 FIFA World Cup
    World Cup. Brazil was crowned the winner after defeating Italy 3–2 in a penalty shootout at the Rose Bowl in Pasadena, California, near Los Angeles, after...
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  • earlier. Despite growing competition, criticism remains over the financial gap between elite clubs and the rest of the league. Manchester City's 2011–12...
    243 KB (18,365 words) - 09:46, 14 June 2025
  • Gay wage gap Gender inequality in Mexico Gender inequality in China Gender inequality in India Income inequality metrics Motherhood penalty Productivity-pay...
    679 bytes (119 words) - 06:45, 22 July 2024
  • Thumbnail for Bill Clinton
    "Reinstatement of the Death Penalty". Findlaw. Retrieved November 24, 2022. "Execution Database | Death Penalty Information Center". Death Penalty Information Center...
    267 KB (25,955 words) - 04:17, 10 June 2025
  • Thumbnail for COVID-19 pandemic
    July 2023. Retrieved 30 July 2023. "COVID pandemic created immunisation gaps in Africa. Over half a million children are at risk". Gavi, the Vaccine Alliance...
    368 KB (32,783 words) - 12:04, 16 June 2025
  • Thumbnail for Sri Lanka
    365 of the Sri Lankan Penal Code criminalises homosexual acts, with a penalty of up to ten years in prison. The UN Human Rights Council has documented...
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  • champions after winning the final against the title holder France 4–2 on penalties following a 3–3 draw after extra time. It was Argentina's third title...
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  • coronavirus regulations to be reviewed". The Justice Gap. "The Government response to covid-19: fixed penalty notices". UK Parliament. "Bill of Rights 1689"...
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  • besides normal penalties such as Gap Opening Penalty (GOP), Gap Extension Penalty (GEP) and Match, PairWise introduced two new penalties called Frame Opening...
    3 KB (399 words) - 17:05, 23 March 2019
  • Thumbnail for Massad Boulos
    Jerusalem. Yassin K. Fawaz, a political analyst, credits Boulos as bridging "the gap between Trump's campaign and these communities, ensuring that their concerns...
    43 KB (3,858 words) - 23:53, 13 June 2025
  • (March 18, 2025). "Steve Kornacki: White men, white women, and the gap within the gender gap". NBC News. Retrieved March 19, 2025. New NBC News polling data...
    467 KB (38,563 words) - 09:37, 18 June 2025