bioinformatics, a sequence database is a type of biological database that is composed of a large collection of computerized ("digital") nucleic acid sequences, protein...

Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences. It involves...

The On-Line Encyclopedia of Integer Sequences (OEIS) is an online database of integer sequences. It was created and maintained by Neil Sloane while researching...

between them. These three databases are primary databases, as they house original sequence data. They collaborate with Sequence Read Archive (SRA), which...

(identical) sequences CluSTr: A single-linkage protein sequence clustering database from Smith-Waterman sequence similarities; covers over 7 mln sequences including...

The GenBank sequence database is an open access, annotated collection of all publicly available nucleotide sequences and their protein translations. It...

sequences and PubMed, a bibliographic database for biomedical literature. Other databases include the NCBI Epigenomics database. All these databases are...

UniProt is a freely accessible database of protein sequence and functional information, many entries being derived from genome sequencing projects. It...

sequences and structures. Biological databases can be classified by the kind of data they collect (see below). Broadly, there are molecular databases...

is composed of three main databases: the Sequence Read Archive, the Trace Archive and the EMBL Nucleotide Sequence Database (also known as EMBL-bank)...

fragments.[citation needed] Thus, sequence database searching faces a bottleneck of limited specificity. Sequence database searching also demands vast search...

nucleotide sequence (called a query) with a library or database of sequences, and identify database sequences that resemble the query sequence above a certain...

contain sequence information and some databases even provide means for performing sequence based queries, the primary attribute of a structure database is...

proteomic research, and scientific studies. It contains protein sequences databases PIR was established in 1984 by the National Biomedical Research Foundation...

The Sequence Read Archive (SRA, previously known as the Short Read Archive) is a bioinformatics database that provides a public repository for DNA sequencing...

specialized databases have been founded to collect mitochondrial genome sequences and other information. Although most of them focus on sequence data, some...

interface for the EMBL DNA sequence database which was also used as interface for the Reptile Database. In 2006, the database moved to The Institute of...

PSSRdb (Polymorphic Simple Sequence Repeats database) is a database of polymorphic simple sequence repeats sequence repeats Kumar, Pankaj; Chaitanya Pasumarthy...

Nucleotide Sequence Database Collaboration, a public database which can be searched on the web. A few of the listed genomes may not be in the INSDC database, but...

A nucleic acid sequence is a succession of bases within the nucleotides forming alleles within a DNA (using GACT) or RNA (GACU) molecule. This succession...

triggers, types, sequences, materialized views, synonyms, database links, directories, XML schemas, and other elements. A database generally stores its...

as a DNA, RNA, or protein sequence or ‘keyword’ and search one or more databases for information related to that sequence. Summaries and aggregate results...

pairwise sequence comparisons, and those that use phylogenetic methods. Sequence comparison methods were first pioneered in the COGs database in 1997....

Santa Cruz (UCSC). It is an interactive website offering access to genome sequence data from a variety of vertebrate and invertebrate species and major model...

genome (also known as a reference assembly) is a digital nucleic acid sequence database, assembled by scientists as a representative example of the set of...

access to all databases simultaneously with a single query string and user interface. Entrez can efficiently retrieve related sequences, structures, and...

In the field of databases in computer science, a transaction log (also transaction journal, database log, binary log or audit trail) is a history of actions...

The DNA Data Bank of Japan (DDBJ) is a biological database that collects DNA sequences. It is located at the National Institute of Genetics (NIG) in the...

A sequence number is a consecutive number in a sequence of numbers, usually of real integers (natural numbers). Sequence numbers have many practical applications...

In bioinformatics, a sequence alignment is a way of arranging the sequences of DNA, RNA, or protein to identify regions of similarity that may be a consequence...