Nextstrain is a collaboration between researchers in Seattle, United States and Basel, Switzerland which provides a collection of open-source tools for...

In 2017, Hadfield et al. announced Nextstrain, intended "for real-time tracking of pathogen evolution". Nextstrain has later been used for tracking SARS-CoV-2...

assigned to a lineage in the Pango nomenclature system and to clades in the Nextstrain and GISAID systems. During the COVID-19 pandemic, the SARS-CoV-2 virus...

GISAID project has assigned it the clade identifier GR/484A, and the Nextstrain project has assigned it the clade identifiers 21K and 21L, both belonging...

2020. "Nexstrain SARS-CoV-2 Dashboard". nextstrain.org. Retrieved 29 December 2020. "Nextstrain". docs.nextstrain.org. Retrieved 29 December 2020. Li Y...

larger clades. Several different clade nomenclatures have been proposed. Nextstrain divides the variants into five clades (19A, 19B, 20A, 20B, and 20C), while...

21K can mean: A half marathon The NextStrain clade identifier for SARS-CoV-2 Omicron variant 21-karat gold This disambiguation page lists articles associated...

systems for naming and tracking SARS-CoV-2 genetic lineages by GISAID, Nextstrain and Pango. The expert group convened by the WHO recommended the labelling...

evolution of different genetic variants. Hodcroft is a developer on the Nextstrain project, an open science project that tracks the transmission chains of...

and deltacoronaviruses primarily infect birds. "Nextstrain, phylogenetic tree of Beta-CoV". nextstrain.org. Wertheim JO, Chu DK, Peiris JS, Kosakovsky...

quarantine via a phone app and informs authorities about their compliance. Nextstrain is an open source platform for pathogen genomic data such as about viral...

of novel coronavirus - Europe-focused subsampling". nextstrain.org. Maintained by the Nextstrain team. Retrieved 13 November 2020. Bachrach 1953, p. 326...

the Omicron variant as a SARS-CoV-2 variant of concern. The image shows one Nextstrain-based visualization of genetic distance of several such variants....

and L452R. It is identified as the 21A, 21I, and 21J clades under the Nextstrain phylogenetic classification system. The virus has also been referred to...

December 2020 to 1 February 2021 in Israel. During this period, according to Nextstrain, the dominant variant in Israel was lineage B.1.1.50 and the Alpha variant...

covid19forecasthub.org. Retrieved 2021-02-21. "Nextstrain". nextstrain.org. Retrieved 2021-04-26. "Nextstrain". nextstrain.org. Retrieved 14 December 2023. "SIMID...

Global Outbreak Lineages (pangolin) tool, dubbed it lineage B.1.1.7, while Nextstrain dubbed the variant 20I/501Y.V1. The name VOC-202102/02 refers to the variant...

hdl:10665/330991. "Genomic epidemiology of novel coronavirus – Global subsampling". Nextstrain. Archived from the original on 20 April 2020. Retrieved 7 May 2020. Cohen...

1598. doi:10.3390/w12061598. "Phylogeny of SARS-like betacoronaviruses". nextstrain. Retrieved 18 January 2020. ProMED. MERS-CoV–Eastern Mediterranean (06)...

monovalent). 28 September 2020 to January 2021, United Kingdom. According to Nextstrain, during this period, the Alpha variant completely replaced the previously...

epidemiology of the 2018–19 Ebola epidemic". nextstrain.org. Retrieved 9 November 2019. open source (see Nextstrain) "Safety and Health Topics | Ebola". Occupational...

the emergence and spread of other frequent clusters of sequences using Nextstrain. A systematic, and possibly first large-scale, cross-sectoral analysis...

Godmother Massimo Bottura Miley Cyrus Google Classroom Invisible Hands Nextstrain (Nextstrain.org) Tatiana Prowell, MD Shopping Angels Some Good News w/ John...

clinical trial in Russia also found an efficacy of 79%. According to Nextstrain, lineage B.1.1.317 was the dominant variant in Russia during the study...

PMID 36264825. S2CID 249649677. Retrieved 22 July 2022. "Nextstrain – Monkeypox". nextstrain.org. Retrieved 22 July 2022. "The world is 'losing the window'...

Aanensen. Colloquial names of COVID-19 variants Variants of SARS-CoV-2 Nextstrain INSDC "Release 4.3.1". 26 July 2023. Retrieved 1 August 2023. O’Toole...

California rose from 3% to 25%. A preprint describes CAL.20C as belonging to Nextstrain clade 20C and contributing approximately 36% of samples, while an emerging...

Tools used in the pandemized outbreak of COVID-19 included PANGOLIN and Nextstrain.[relevant?] In July 2021, scientists reported the detection of anomalous...

under the British Open Government Licence v3.0: "Dedicated 21A/S:154K Nextstrain build". covariants.org. 8 June 2021. Retrieved 11 June 2021. Nuki, Paul;...

Charlton; Sagulenko, Pavel; Bedford, Trevor; Neher, Richard A. (2018). "Nextstrain: Real-time tracking of pathogen evolution". Bioinformatics. 34 (23): 4121–4123...