• The Protein Data Bank (PDB) is a database for the three-dimensional structural data of large biological molecules such as proteins and nucleic acids, which...
    17 KB (1,665 words) - 16:43, 16 April 2024
  • Protein Data Bank (PDB) file format is a textual file format describing the three-dimensional structures of molecules held in the Protein Data Bank,...
    8 KB (899 words) - 22:34, 25 March 2024
  • period. Data repository List of databases Star Wars Databank Protein Data Bank National Trauma Data Bank Memory bank International Tree-Ring Data Bank Hazardous...
    2 KB (270 words) - 04:39, 24 April 2023
  • of a protein. The Protein Data Bank (PDB) was established in 1971 as the central archive of all experimentally determined protein structure data. Today...
    7 KB (756 words) - 10:13, 3 January 2024
  • Protein Data Bank, wwPDB, is an organization that maintains the archive of macromolecular structure. Its mission is to maintain a single Protein Data...
    4 KB (404 words) - 04:29, 11 April 2024
  • Thumbnail for Macromolecular Crystallographic Information File
    representing macromolecular structure data, developed by the International Union of Crystallography (IUCr) and the Protein Data Bank It is an extension of the Crystallographic...
    4 KB (358 words) - 22:23, 1 September 2023
  • Thumbnail for Structural bioinformatics
    contact determination. The Protein Data Bank (PDB) is a database of 3D structure data for large biological molecules, such as proteins, DNA, and RNA. PDB is...
    35 KB (3,524 words) - 00:08, 31 March 2024
  • Thumbnail for Protein
    Protein Data Bank contains 181,018 X-ray, 19,809 EM [definition needed]and 12,697 NMR[definition needed] protein structures. The number of proteins encoded...
    87 KB (9,875 words) - 00:02, 21 April 2024
  • Thumbnail for Protein tertiary structure
    knowing the protein's primary structure and comparing the possible predicted tertiary structure with known tertiary structures in protein data banks. This only...
    15 KB (1,603 words) - 17:26, 23 April 2024
  • atomic numbers) and cartesian coordinates. The Protein Data Bank Format is commonly used for proteins but is also used for other types of molecules. There...
    20 KB (1,941 words) - 19:53, 6 February 2024
  • the contents of each 3D macromolecular structure deposited in the Protein Data Bank (PDB). The original version of the database was developed around 1995...
    5 KB (502 words) - 16:45, 29 January 2024
  • Bradley AR, Christie CH, et al. (January 2017). "The RCSB protein data bank: integrative view of protein, gene and 3D structural information". Nucleic Acids...
    37 KB (2,874 words) - 20:13, 14 March 2024
  • Protein–RNA Interface Database (PRIDB) is a database of protein–RNA interfaces extracted from the Protein Data Bank. RNA-binding protein Protein Data...
    1 KB (76 words) - 22:15, 20 July 2020
  • data center within the Worldwide Protein Data Bank (wwPDB) partnership. As the designated Archive Keeper, RCSB PDB ensures the security of PDB data and...
    62 KB (6,672 words) - 07:25, 29 April 2024
  • Thumbnail for Membrane protein
    curated list of selected transmembrane proteins from the Protein Data Bank MemProtMD - a database of membrane protein structures simulated by coarse-grained...
    18 KB (1,819 words) - 23:55, 25 April 2024
  • Protein Data Bank (PDB) file, interacting with Jmol and many more. This application programming interface (API) provides various file parsers, data models...
    33 KB (4,098 words) - 17:33, 18 January 2024
  • Thumbnail for RasMol
    explore biological macromolecule structures, such as those found in the Protein Data Bank (PDB). It was originally developed by Roger Sayle in the early 1990s...
    4 KB (366 words) - 21:09, 23 January 2024
  • experimentally measured binding affinity data (Kd, Ki, and IC50) for the protein-ligand complexes deposited in the Protein Data Bank (PDB). It thus provides a link...
    4 KB (543 words) - 10:31, 16 March 2024
  • Thumbnail for C-reactive protein
    Committee. "#CAA39671". NCBI Entrez Protein. "Human C-reactive protein complexed with phosphocholine". Protein Data Bank in Europe. Enocsson H, Karlsson J...
    45 KB (5,078 words) - 05:16, 10 February 2024
  • The Protein Circular Dichroism Data Bank (PCDDB) is a database of circular dichroism and synchrotron radiation. Circular dichroism Synchrotron Radiation...
    2 KB (82 words) - 13:29, 27 March 2024
  • that generates schematic 2-D representations of protein-ligand complexes from standard Protein Data Bank file input. The LIGPLOT is used to generate images...
    1 KB (76 words) - 23:06, 17 July 2023
  • Thumbnail for Integral membrane protein
    addition, structures of many water-soluble protein domains of IMPs are available in the Protein Data Bank. Their membrane-anchoring α-helices have been...
    9 KB (1,035 words) - 19:59, 25 January 2024
  • arrangement of transmembrane and peripheral proteins in membranes. Proteins structures are taken from the Protein Data Bank. OPM also provides structural classification...
    11 KB (923 words) - 16:55, 23 February 2024
  • Thumbnail for Protein structure
    difference between large numbers. Around 90% of the protein structures available in the Protein Data Bank have been determined by X-ray crystallography. This...
    36 KB (4,022 words) - 18:30, 19 February 2024
  • Phycoerythrin (category Protein pages needing a picture)
    weight of R-PE is 250,000 daltons. Crystal structures available in the Protein Data Bank contain in one (αβ)2 or (αβγ)2 asymmetric unit of different phycoerythrins:...
    22 KB (2,010 words) - 13:43, 9 March 2024
  • Thumbnail for Catalase
    activator. Three-dimensional protein structures of the peroxidated catalase intermediates are available at the Protein Data Bank. Hydrogen peroxide is a harmful...
    39 KB (4,224 words) - 08:06, 20 April 2024
  • Thumbnail for Heteroatom
    Heteroatom (section Proteins)
    in specialised contexts. In the description of protein structure, in particular in the Protein Data Bank file format, a heteroatom record (HETATM) describes...
    3 KB (323 words) - 07:41, 20 March 2024
  • Thumbnail for Hemoprotein
    Hemoprotein (redirect from Heme protein)
    Data on heme protein structure and function has been aggregated into The Heme Protein Database (HPD), a secondary database to the Protein Data Bank....
    22 KB (2,446 words) - 07:34, 9 April 2024
  • digital repository managers, data center staff, and others who collect, manage, and store digital information. The Protein Data Bank was established in 1971...
    13 KB (1,346 words) - 08:39, 27 March 2024
  • Thumbnail for Photosystem
    Month in the Protein Data Bank Photosystem II: Molecule of the Month in the Protein Data Bank Photosystem II: ANU UMich Orientation of Proteins in Membranes...
    13 KB (1,699 words) - 16:39, 24 March 2024