bioinformatics, a sequence database is a type of biological database that is composed of a large collection of computerized ("digital") nucleic acid sequences, protein...

Nucleotide Sequence Database Collaboration (INSDC) consists of a joint effort to collect and disseminate databases containing DNA and RNA sequences. It involves...

between them. These three databases are primary databases, as they house original sequence data. They collaborate with Sequence Read Archive (SRA), which...

The GenBank sequence database is an open access, annotated collection of all publicly available nucleotide sequences and their protein translations. It...

The On-Line Encyclopedia of Integer Sequences (OEIS) is an online database of integer sequences. It was created and maintained by Neil Sloane while researching...

sequences and structures. Biological databases can be classified by the kind of data they collect (see below). Broadly, there are molecular databases...

(identical) sequences CluSTr: A single-linkage protein sequence clustering database from Smith-Waterman sequence similarities; covers over 7 mln sequences including...

sequences and PubMed, a bibliographic database for biomedical literature. Other databases include the NCBI Epigenomics database. All these databases are...

is composed of three main databases: the Sequence Read Archive, the Trace Archive and the EMBL Nucleotide Sequence Database (also known as EMBL-bank)...

contain sequence information and some databases even provide means for performing sequence based queries, the primary attribute of a structure database is...

The Sequence Read Archive (SRA, previously known as the Short Read Archive) is a bioinformatics database that provides a public repository for DNA sequencing...

nucleotide sequence (called a query) with a library or database of sequences, and identify database sequences that resemble the query sequence above a certain...

genome (also known as a reference assembly) is a digital nucleic acid sequence database, assembled by scientists as a representative example of the set of...

UniProt is a freely accessible database of protein sequence and functional information, many entries being derived from genome sequencing projects. It...

fragments.[citation needed] Thus, sequence database searching faces a bottleneck of limited specificity. Sequence database searching also demands vast search...

A nucleic acid sequence is a succession of bases within the nucleotides forming alleles within a DNA (using GACT) or RNA (GACU) molecule. This succession...

Nucleotide Sequence Database Collaboration, a public database which can be searched on the web. A few of the listed genomes may not be in the INSDC database, but...

needed to gain BARCODE designation in the international nucleotide sequence databases. Because of its web-based delivery and flexible data security model...

specialized databases have been founded to collect mitochondrial genome sequences and other information. Although most of them focus on sequence data, some...

Fibonacci sequence is a sequence in which each number is the sum of the two preceding ones. Numbers that are part of the Fibonacci sequence are known...

broad classes: database search and de novo search. The former search takes place against a database containing all amino acid sequences assumed to be present...

The DNA Data Bank of Japan (DDBJ) is a biological database that collects DNA sequences. It is located at the National Institute of Genetics (NIG) in the...

PANDIT is a database of multiple sequence alignments and phylogenetic trees covering many common protein domains. Pfam: database of protein domains Phylogeny...

access to all databases simultaneously with a single query string and user interface. Entrez can efficiently retrieve related sequences, structures, and...

(including drawings, sketches and illustrations) animation sequences, audio and video. A Multimedia Database Management System (MMDBMS) is a framework that manages...

list of sequence alignment software is a compilation of software tools and web portals used in pairwise sequence alignment and multiple sequence alignment...

laboratories worldwide. In addition to maintaining the GenBank nucleic acid sequence database, the National Center for Biotechnology Information (NCBI) provides...

In bioinformatics, a sequence alignment is a way of arranging the sequences of DNA, RNA, or protein to identify regions of similarity that may be a consequence...

PSSRdb (Polymorphic Simple Sequence Repeats database) is a database of polymorphic simple sequence repeats sequence repeats Kumar, Pankaj; Chaitanya Pasumarthy...

data in a set of databases, including Ensembl (housing whole genome sequence data), UniProt (protein sequence and annotation database) and Protein Data...