The Smith–Waterman algorithm performs local sequence alignment; that is, for determining similar regions between two strings of nucleic acid sequences...

Smith-Waterman algorithm does. The Smith-Waterman algorithm was an extension of a previous optimal method, the Needleman–Wunsch algorithm, which was the...

searches for local alignment detection in a database using the Smith–Waterman algorithm. FASTA is pronounced "fast A", and stands for "FAST-All", because...

architecture adds support for new instructions, including the Smith–Waterman algorithm. Like Ampere, TensorFloat-32 (TF-32) arithmetic is supported. The...

matching between unrectified or distorted images. Wagner–Fischer algorithm Smith–Waterman algorithm Sequence mining Levenshtein distance Dynamic time warping...

Foundation Smith–Waterman algorithm Waterman butterfly projection USS Waterman, a 1943 Cannon-class destroyer escort Search for "Waterman" , "water-man"...

computer science, Thompson's construction algorithm, also called the McNaughton–Yamada–Thompson algorithm, is a method of transforming a regular expression...

This is further generalized by DNA sequence alignment algorithms such as the Smith–Waterman algorithm, which make an operation's cost depend on where it...

Temple Ferris Smith (born March 7, 1939) is an emeritus professor in biomedical engineering who helped to develop the Smith-Waterman algorithm with Michael...

This is further generalized by DNA sequence alignment algorithms such as the Smith–Waterman algorithm, which make an operation's cost depend on where it...

Wikibooks has a book on the topic of: Algorithm Implementation/Strings/Longest common substring In computer science, a longest common substring of two...

particular, the Smith-Waterman algorithm (developed with Temple F. Smith) is the basis for many sequence alignment programs. In 1988, Waterman and Eric Lander...

linear in the lengths of the remaining sequences, so the time for this algorithm would be O ( 2 n 1 ∑ i > 1 n i ) . {\displaystyle O\left(2^{n_{1}}\sum...

MHz Shortwave radiation, in visible and near visible bands Smith–Waterman algorithm, algorithm for performing local sequence alignment Sport wagon or crossover...

Needleman–Wunsch algorithm: find global alignment between two sequences Smith–Waterman algorithm: find local sequence alignment Exchange sorts Bubble sort: for...

use of closely related algorithms such as Needleman–Wunsch algorithm or Smith–Waterman algorithm.[citation needed] The algorithm can be used with any set...

Naiouf, Marcelo; Prieto-Matias, Manuel (2016-06-30). "OSWALD: OpenCL Smith–Waterman on Altera's FPGA for Large Protein Databases". International Journal...

mining BLAST String searching algorithm Alignment-free sequence analysis UGENE Needleman–Wunsch algorithm Smith-Waterman algorithm Sequence analysis in social...

developed by Carl Pomerance 1981 – Smith–Waterman algorithm developed by Temple F. Smith and Michael S. Waterman 1983 – Simulated annealing developed...

automaton Sequence alignment BLAST Hirschberg's algorithm Needleman–Wunsch algorithm Smith–Waterman algorithm Data structure DAFSA Suffix array Suffix automaton...

This is further generalized by DNA sequence alignment algorithms such as the Smith–Waterman algorithm, which make an operation's cost depend on where it...

name, it matches any value, but does not bind the value to any name. Algorithms for matching wildcards in simple string-matching situations have been...

Metaphone Needleman–Wunsch algorithm Plagiarism detection Regular expressions for fuzzy and non-fuzzy matching Smith–Waterman algorithm Soundex String metric...

JAligner is an open source Java implementation of the Smith-Waterman algorithm with Gotoh's improvement for biological local pairwise sequence alignment...

earlier publication showing a significant acceleration of the Smith-Waterman algorithm for aligning two sequences. A profile HMM is a variant of an HMM...

insertions and deletions. BFAST works with the Smith–Waterman algorithm. Bowtie is a short aligner using an algorithm based on the Burrows–Wheeler transform and...

an algorithm for compiling a regular expression to an NFA that can efficiently perform pattern matching on strings. Conversely, Kleene's algorithm can...

selecting the optimum. Different variants exist, see Smith–Waterman algorithm and Needleman–Wunsch algorithm. The Tower of Hanoi or Towers of Hanoi is a mathematical...

PrefixSpan algorithm and place the products on shelves based on the order of mined purchasing patterns. Commonly used algorithms include: GSP algorithm Sequential...

generally true. The PairWise algorithm is a variant of the Smith–Waterman algorithm best local alignment algorithm. These algorithms all belong to the class...